Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00472 ATGGTCTTCTCAACTGTCTTTCTCCATGAAGATGACACCTTTTTTTCTAGAAAAAGGCCAAGAGTGTCAGATCTTGGACATCAAGATATAGATTTACATGCAGATGCAGGAAGTTCCAGTGATATTTCCTTGTTCTCGCATCAAGATATAGAAAGGGGTACTGGTGATGTTCCCTCTTCCAGCAATACTGATGATAAAGTTGATCCAGATTCTGGAGTGGAGATGAGCTGCCCGTCAAATGTTAAGAGTGGCTATGTCCCTGTGTGTTCTACCACAGGGCATATTTCACACATGGACCAGAGTTTCTGTGGCTATGTGCAACAACCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAACAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCATCTGAGCTTCCTGTGTATCCAGTGATTAATGGCACACTAATGAGCCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTTGCATATCTGAGTATGGGTTTCTCAGGCACAAGGGTGCCAACAATGGCAGCATATGAGCAAGATAGGTCTTTTGAGCATGCTGCTCCTCTGGCTGTTAATCCTGATTCACAGCCAGTTTCACAGTCACATGTCAATTACTGCATTAAGGAATCCAATCACGTAAATTCAAACTCAGAGGCATTCAAAAGTTTAATATCTTGTCAGATGTTAGGTGTAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATGAAACATGGGCCTCATTCTATTAACGAATTGATTTCCTGGAACCGTCATGGATATCTGAAAGATTCAACAGTGATCTCTCATTCTGACAATAAGTACGACACCTTTGTGCTATTGTCTGCTGTAAATGCATTAAAAGGAGATATCTCTGGAACCATTTGTAGATCAGGTTCCCCAAGTAACGAGGTTGGTGATATGGTAAACTTAATTGGTGAAATATCTGAGGACATTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCTCGCAGAGTTGTGCTAGATGGAATTATTGGTGATATCATTGCAGAATTTGTTACGGAAAAGAAACGTACGAGGCATAAGCTTGAATCAGCTGATTGTACTCCTGGAAACAATATGATTAGTAGAGGTTCTGCTATTTCCAGTGATCCTGCATCTTCCCACACTTTGGACGATCAGACTTGTCATGAAAGTTCCAGACTGCCCCCTGCCATCATTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGCAAGGTACTTCTTGATTATTCCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACACTAGCAGAATACTTATCTTCCTGGAGGAAAAAGAAGCTTTGGTCTCATCGTAAGCCTCAACCTTCTGCTAATGAATGTGAAGATCATACTGAAAAGATTGAATCAGAAGCTTTGGTTATCAATCCAGATACTTCTGAAAGCAATGTTGATGGCTATAATCAGTTTGGAGTACTGGCAACAGAAAAAAATTGTCCCCGGTTATTTTCATCTTCCAGTAGCCTCAAAGGTGGAAACTTACTAGAAGGTCAAAAAGTTTCATGCCTTTATGATAACTCTAGAGATTTGACTTGTATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCTTTAGCTGATTACATTCAAAGTTTTATTGAAAAGGAAGTGAACAAATTAATTCCTTTCCCAGAAGAAAACAAATTTAATGAGGTTGCTGTTGGAGACACTCGTTTTTCAGAGAAACTTGCAGATAAAACGTCTGTGAAGGAAATTCTAAATGACAAGTCTGTGGATCCTGCAAAGGCTGGAAATTCTTTTGGCGAGTCTGCGTCTGGAAACCATATGTCTGACGTATTTTCGAAAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGAGGAGATTGATGACCTACCACCTGGGCTTGAGAAATCTCAAACAGTTGCCCTTCACTACAATTCCAAATTTCGACCTTCAAGGTCGGCTGAATGTAATCTTAAGATAACAGAATATGTTGCTACAGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTGGAAAAGTGGAGGTCGTTGTTTCTTGATTCTGTGCCCAAGCAAGTTTTTATATCATCAAGCACCATAAAGAAACATTTCAAGTCTGATGGTCATAAGAAAAGAAAAACGGTCAATGCAAGCAAGGAACATTTGAATAGTGCTACTTCTGGACTGGGAAGAGTGAAGGAAGGAGCAAAGAGTTCTTCTGAAGTTCCTCCGGTGATTGGAAAGTATACCTATTGCCGCAAGAAACTGTCAAGGAAGGAGTTAATTTCCTCAAAATCTGTAGCAGAAAATGATTCTAGGCCAGGTAAGCAGCCTGTGGCCAAGTTGAGGAAACATTTTTCTGGAGATGTTGGTGAGGCTGCAGAGGTTAAAATAGCTTCTGTTATACATGGAAAGACAAAGATGATTAAAGGGAAGAAGGATACAACTTCTAAGGGCAAATCTTCTGTCAGTGTCAATAGTAGCTCACACAATGATCAATTATCTTTAAAGAATAAAGCTGGTCAAAAAGTGTTGAAGTTTTCGGATGATGTTAAAGATTTTGTAAAATCCAATGTAAAGAAGCTTTCAGCATCAACTGATAATAGCGTTGTCATGAAGAAGATTGTCAAAAGTGATGGCACTGTTAAAGAGAAGGTCACAAGTCATTGCTCCAGAGAGATACAAAATGCAACAATGAAAGTATCAAAATCAAAAAGGAAACATCAAATGGATGGTACAGCATCTTCACATCCTACAAAGGTTTTGAAAATTTCAAATGGTGGTGCTTATCTGGGAGCCAGTAAACAAGTTACTGTGGCAAGTAGGAAGTCTGCTAAATCCAAGCCACTGAATTTGTGTCCTAGATCTGATGGATGTGCCAGGACTTCTATTGATGGCTGGGAATGGCATAAATGGTCCCGAAGTGCCAGTCCTGCATATAAAGCACGTGTTAGGGGTCTTCCATGTGTCCAGAACAAGTGCATAGATTCTGAAAATAATTTATCTCAGTTGTCAAATGGCAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAGAAGCATTTGCGTTTTCAAAGGAGCAAGATCCATGATTGGGGTCTTCTTGCCTTGGAGCCAATTGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTGATTCGTCCTCGGATATCTGATATACGTGAACGTCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACCAAGAGAGGTGGGATTGCAAGATTTGTTAACCACTCTTGTGAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCGAAACGGCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGTAACTGTGGCTCCAGAAAGTGTCGTGGATCATTGAATTAG 3654 0.4031 MVFSTVFLHEDDTFFSRKRPRVSDLGHQDIDLHADAGSSSDISLFSHQDIERGTGDVPSSSNTDDKVDPDSGVEMSCPSNVKSGYVPVCSTTGHISHMDQSFCGYVQQPAFVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINGTLMSPVPLNYFKQFPDHVSTGFAYLSMGFSGTRVPTMAAYEQDRSFEHAAPLAVNPDSQPVSQSHVNYCIKESNHVNSNSEAFKSLISCQMLGVECCWLYEDEKGMKHGPHSINELISWNRHGYLKDSTVISHSDNKYDTFVLLSAVNALKGDISGTICRSGSPSNEVGDMVNLIGEISEDISSQLHMGIMKAARRVVLDGIIGDIIAEFVTEKKRTRHKLESADCTPGNNMISRGSAISSDPASSHTLDDQTCHESSRLPPAIIKSVGSIENFWWSYAVVRKVLLDYSMQVMWNAVFFDTLAEYLSSWRKKKLWSHRKPQPSANECEDHTEKIESEALVINPDTSESNVDGYNQFGVLATEKNCPRLFSSSSSLKGGNLLEGQKVSCLYDNSRDLTCILESVENELHFSSKVSLADYIQSFIEKEVNKLIPFPEENKFNEVAVGDTRFSEKLADKTSVKEILNDKSVDPAKAGNSFGESASGNHMSDVFSKAFKELCGYVDDVVEEEIDDLPPGLEKSQTVALHYNSKFRPSRSAECNLKITEYVATALCRQKLHDEVLEKWRSLFLDSVPKQVFISSSTIKKHFKSDGHKKRKTVNASKEHLNSATSGLGRVKEGAKSSSEVPPVIGKYTYCRKKLSRKELISSKSVAENDSRPGKQPVAKLRKHFSGDVGEAAEVKIASVIHGKTKMIKGKKDTTSKGKSSVSVNSSSHNDQLSLKNKAGQKVLKFSDDVKDFVKSNVKKLSASTDNSVVMKKIVKSDGTVKEKVTSHCSREIQNATMKVSKSKRKHQMDGTASSHPTKVLKISNGGAYLGASKQVTVASRKSAKSKPLNLCPRSDGCARTSIDGWEWHKWSRSASPAYKARVRGLPCVQNKCIDSENNLSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKHLRFQRSKIHDWGLLALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFVNHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGSRKCRGSLN 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00472 1217 ProSiteProfiles SET domain profile. 1078 1195 IPR001214 GO:0005515
Gma09g00472 1217 MobiDBLite consensus disorder prediction 389 409 - -
Gma09g00472 1217 ProSiteProfiles Post-SET domain profile. 1201 1217 IPR003616 -
Gma09g00472 1217 MobiDBLite consensus disorder prediction 389 405 - -
Gma09g00472 1217 CDD SET_SETD1 1066 1213 - -
Gma09g00472 1217 SMART gyf_5 250 304 IPR003169 GO:0005515
Gma09g00472 1217 MobiDBLite consensus disorder prediction 844 873 - -
Gma09g00472 1217 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 14 1217 - -
Gma09g00472 1217 SUPERFAMILY GYF domain 247 303 IPR035445 -
Gma09g00472 1217 MobiDBLite consensus disorder prediction 50 66 - -
Gma09g00472 1217 Pfam SET domain 1090 1194 IPR001214 GO:0005515
Gma09g00472 1217 SMART PostSET_3 1201 1217 IPR003616 -
Gma09g00472 1217 Gene3D - 242 320 IPR035445 -
Gma09g00472 1217 Gene3D - 105 176 IPR035445 -
Gma09g00472 1217 MobiDBLite consensus disorder prediction 936 955 - -
Gma09g00472 1217 MobiDBLite consensus disorder prediction 854 873 - -
Gma09g00472 1217 MobiDBLite consensus disorder prediction 50 74 - -
Gma09g00472 1217 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 14 1217 IPR044570 GO:0042800|GO:0051568
Gma09g00472 1217 SMART set_7 1078 1201 IPR001214 GO:0005515
Gma09g00472 1217 SUPERFAMILY SET domain 1073 1214 IPR046341 -
Gma09g00472 1217 Gene3D SET domain 1005 1217 IPR046341 -
Gma09g00472 1217 ProSiteProfiles GYF domain profile. 249 305 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00472 Gma-Chr9 4626502 4643824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00472 1069 1217 C2H2 Transcription Factor Family AT2G23740 37.427 1.29e-18 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma09g00472 SET 2.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00472 - - gmx:100805708 2392.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01483 15 13466198 13479632 Gma09g00472 09 4626502 4643824 GST