Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00458 ATGAAGTGTTTTTCTCTCTTGTTATTTGCATTTTGGTCTATATATATCCACCTGTTTTCTCTCTTTTCATTGAACTCACTATGGTTTATCTCAAACATAACTGTTTTTGCATCAGGaaatgagattgatcatttggcactgataaatttcaagaaattcatatctactgatccatatggaatcttgttctcttggaatacttctactcatttttgtaattggcatggaatcacatgcaatctcatgctccaaagagttacagagttaaacttgcaaggatacaagttgaagggatccatatctccgcacgtaggcaatctctcttacatgacaaacttcaaccttgaaggcaacaacttctacgagaaaatcccaaaagaattgggacggttgtcacgattacagaaactctctatcgaaaacaactcattgggaggggaaattcctacaaacttgacaggttgtactcatctcaaACTCTTGAACTTAGGTGGGAACAATTTGACTGGCAAAATACCGATCGAAATTGGCTCACTTCAGAAGCTTACATATTTGAGCCTTTATATGAATCAATTAACTGGAGGAATCCCATCATTCATAGGGAATCTTTCATCCTTAATTGTTTTCTCAGTGGATACTAACAACTTAGAGGGAGATATTCCGCAGGAAATATGCCATCTCAAAAACTTGACAGAGGTAGAATTGGGTATCAACAAACTGAGTGGGACATTGCCTTCATGTCTTTATAATATGTCATCTCTCACTACAATCTCAGCTTCAGTAAATCAACTTAGAGGCTCTCTTCCACCCAACATGTTCCACACCCTTCCCAATCTCCAAGAACTTTATATTGGTGGCAATCATATCTCAGGGCCAATCCCACCTTCCATCACAAATGCATCTGCCCTCTTAGTACTTGACATCAATTCAAACAATTTCATAGGACAAGTTCCAAGTCTGAGGAAGCTACAAGATCTTCAACGTCTATCTTTGCCTGTGAACAATCTAGGTAACAATTCAACTAATGGTTTGGAGTTCATAAAATCATTGGCAAATTGTAGTAAGTTGCAAATGTTAGCTATATCCTACAATGATTTTGGAGGTCATTTGCCAAATTCCTTGGGCAATTTATCCACCCAGCTTAGTCAACTATATCTCGGAGGTAATTGGATATCAGGAGAAATCCCTGCATCAATAGGAAATCTAATTGGCTTAACTCTCTTGGGGATAGAAGATAACCTCATTGATGGGATTATCCCAATAACTTTTGGGAAGCTTCAGAAGATGCAAAAGTTAGACTTAGGCACAAACAAGCTGTCAGGAGAGATAGGAACCTTTTTAAGAAACCTTAGTCAATTGTTTTATTTGGGTTTGGGAGATAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAATTGCCAAAAGTTACAATATCTAGGTCTTTGGCAAaacaaccttaaaggaaccatacccttagaaatttttaatctttcctctctaacaaatgtgttggatttgtcacagaactcattgagtgggattataccggaagaagtgggcatccttaaacatgtagatttgctaaatttgtctgaaaatcatttgtctggtcgcattcctgaaactatcggagaatgcataatgttagagtacctatatttgcaagggaattccttatatggaatcataccatcctctttggcttcactgattggtctaatagaattagacctctcaaaaaatcgcttgtctggaacaattcctgatgttctgcaaaatatttctgttttggaattgttgaatgtatcttttaacatgttggatggtgaggtaccaactgaaggtgtctttcaaaatgcaagtgggttaggggtgatcggaaatagtaaactttgtggaggcatttcagaactgcatctaccaccatgcCGTATCAAAGGTAAAAAACTTGCAAAACACCACAAGTTCAGGATGATAGCAATTTTAGTTAGTGTGGTTGCTTTTCTTGTCATACTTTCAATTATTCTAACTATCTACTGGATGAGAAAGAGGAGTAACAAACCATCTATGGATTCTCCAACAATTGACCAGCTGGctaaagtttcataccaaatcctacacaatggaactaatggattctcgactacacaattgatagggtctggaaattttagctctgtctacaaaggaacacttgagttagaagacaaagttgttgccattaaggtcctaaaccttcaaaagaaaggagctcacaagagtttcattgttgaatgcaatgcacttaaaaatattaagcatcgaaatctagttcagattttaacatgttgttccagcacagattataaaggtcaagaatttaaagctctaatttttgagtacatgaaaaatggaagcttagaccaatggttgcatccaaggactctaagtgcagagcatccaagaacattaaaccttgatcaaagattaaatatcatgattgatgttgcttttgcaatacattatcttcattatgaatgtgagcaatcgatcattcattgtgatttaaagccaagcaatgtccttcttgatgatgacatgattgctcatgtaagtgattttggcatagcaagacttctttcaaccattaatggtaccacttctaaggaaacaagtacaattggaataagggggactgttggctatgctcctccagagtatggagtgagttctgaggtgtctatgaatggtgacatgtacagtttagggattcttattttggagatgctcaccggaagaagacccacagatgaaatctttgaagatgGTCTGAGATCAAATGCCACAGCTATTTCAGTCAGAAACTGA 2850 0.1709 MKCFSLLLFAFWSIYIHLFSLFSLNSLWFISNITVFASGNEIDHLALINFKKFISTDPYGILFSWNTSTHFCNWHGITCNLMLQRVTELNLQGYKLKGSISPHVGNLSYMTNFNLEGNNFYEKIPKELGRLSRLQKLSIENNSLGGEIPTNLTGCTHLKLLNLGGNNLTGKIPIEIGSLQKLTYLSLYMNQLTGGIPSFIGNLSSLIVFSVDTNNLEGDIPQEICHLKNLTEVELGINKLSGTLPSCLYNMSSLTTISASVNQLRGSLPPNMFHTLPNLQELYIGGNHISGPIPPSITNASALLVLDINSNNFIGQVPSLRKLQDLQRLSLPVNNLGNNSTNGLEFIKSLANCSKLQMLAISYNDFGGHLPNSLGNLSTQLSQLYLGGNWISGEIPASIGNLIGLTLLGIEDNLIDGIIPITFGKLQKMQKLDLGTNKLSGEIGTFLRNLSQLFYLGLGDNMLEGNIPPSIGNCQKLQYLGLWQNNLKGTIPLEIFNLSSLTNVLDLSQNSLSGIIPEEVGILKHVDLLNLSENHLSGRIPETIGECIMLEYLYLQGNSLYGIIPSSLASLIGLIELDLSKNRLSGTIPDVLQNISVLELLNVSFNMLDGEVPTEGVFQNASGLGVIGNSKLCGGISELHLPPCRIKGKKLAKHHKFRMIAILVSVVAFLVILSIILTIYWMRKRSNKPSMDSPTIDQLAKVSYQILHNGTNGFSTTQLIGSGNFSSVYKGTLELEDKVVAIKVLNLQKKGAHKSFIVECNALKNIKHRNLVQILTCCSSTDYKGQEFKALIFEYMKNGSLDQWLHPRTLSAEHPRTLNLDQRLNIMIDVAFAIHYLHYECEQSIIHCDLKPSNVLLDDDMIAHVSDFGIARLLSTINGTTSKETSTIGIRGTVGYAPPEYGVSSEVSMNGDMYSLGILILEMLTGRRPTDEIFEDGLRSNATAISVRN 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00458 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Gma09g00458 949 PANTHER LRR RECEPTOR-LIKE KINASE 28 938 - -
Gma09g00458 949 SUPERFAMILY L domain-like 42 336 - -
Gma09g00458 949 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Gma09g00458 949 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Gma09g00458 949 Gene3D Ribonuclease Inhibitor 335 645 IPR032675 -
Gma09g00458 949 SUPERFAMILY L domain-like 379 634 - -
Gma09g00458 949 SMART serkin_6 714 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00458 949 Pfam Protein kinase domain 715 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00458 949 ProSiteProfiles Protein kinase domain profile. 714 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00458 949 Gene3D Transferase(Phosphotransferase) domain 1 796 947 - -
Gma09g00458 949 SMART LRR_typ_2 450 474 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 523 547 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 571 594 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 179 203 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 131 155 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 276 300 IPR003591 -
Gma09g00458 949 SMART LRR_typ_2 251 275 IPR003591 -
Gma09g00458 949 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Gma09g00458 949 Gene3D Ribonuclease Inhibitor 40 325 IPR032675 -
Gma09g00458 949 SMART LRR_sd22_2 131 154 - -
Gma09g00458 949 SMART LRR_sd22_2 378 404 - -
Gma09g00458 949 SMART LRR_sd22_2 426 452 - -
Gma09g00458 949 SMART LRR_sd22_2 276 302 - -
Gma09g00458 949 SMART LRR_sd22_2 179 205 - -
Gma09g00458 949 SMART LRR_sd22_2 571 597 - -
Gma09g00458 949 SMART LRR_sd22_2 227 253 - -
Gma09g00458 949 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Gma09g00458 949 Pfam Leucine rich repeat 229 289 IPR001611 GO:0005515
Gma09g00458 949 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Gma09g00458 949 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Gma09g00458 949 PANTHER OS04G0122200 PROTEIN 28 938 - -
Gma09g00458 949 SUPERFAMILY Protein kinase-like (PK-like) 687 933 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00458 Gma-Chr9 4454806 4458361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00458 40 934 Receptor kinase-like Gene Family AT3G47570 46.358 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma09g00458 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00458 - - gmx:100801459 1845.09