Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00454 aTGTCTCAACCTGAGTCGTCCCTGGCTTCTACCTTAGCAGAAACCTCTTTGGTAAAGCAAGAGTGTGATATTAGTGATCCTGTTCATGATTTTGCTTCAAGTGATTCAGAGATGGAAGCAAAACGAATAGCAAAGGTTGCTAATCTTGCTATGGCAGAACTCCTTAAGCTTATGAGGATTAATGAGCCTTTATGGGCCAAGTCTTCATATGGTGTGCCGGGATATGTTCTCGTTCGTGAAAGATATGCAAGCATGTTTCCTAGGGTTGATAGCTTGAATAGTCCTCCTCACACTACTCGTGAAGAATCTTCAAAATATTGTAGAGTAGTGAGAATTAGAGCGAGGAAATTGGTTGAGATGCTTTTGGATTCGGAGGAATGGGTTAATCATTTCCCAACAATAGTTTCAAAATCAGAAACAGTCAAAGTGCTTGATGTGGGTTCATTGGAGAATCGAAATGGAGCATTGCAAGTGGTGTGTGAAAAAATGCAGGCTATTTCACCGCTAGTGTCGTCTCGAGAATTATTCTTCCTTCGTTATTGTCAGCAAGTTACAGATGGTACATGGGCCATAGCTCATGTGTCGATTGATTCAATTGAAGGGCGTGTTCTTGATTCTCCAGTTCGGAGGCTTCCATCTGGCTGCGTTATTTATCAAATGAATGAAGAATTTTCCATGGTTATTTGGGCTGAGCACGTGGAAGTGAATGAAAGGATTGCTACATGCTCACGAGGAGGTTTTACTCGTGACAATGTTGCATATGGAGCTGAAAGGTGGCTTTGGGCACTTAATAGAATGTGTGAGAGGTTTGTTTGGACTTCAATAAACAGCATGCCCCCTCAAGCATCTCCAGAAGAGGTGAAGGGATTCAATGCAAGGATGAGGGCCATGAGGTTTTCTAATCGAATGGTTCAAGGATTTTTTGGTGTTTTGTATAAGTTACGTGATGGTGGCCTTGCACAATCTTTAGAGGAAAACAACACCGAGATTAAGATCTCTCTCCGGAAGAACACAACACCAGGCATGCCAGAAGGCATAATTGCCACTGCCATCACTTGCATCAGGCTCCCTGTCCCTCAACAGAATGTTTGTTCCTTCTTCATGGAAGCAAAAAATCGTCCTAAGTGGGATGTTCTGAGCGGTGGATTTGCAGTAAATGAGTTTAGTCATTTCACAATGGGTGGAAGAAATTGTATTTCAATTTTGAAGACTTATAACCGAATAGAGGGCGATGTGTTGATGTTTCAAGATAGTTATATTGATCCTATGGGATCGTATATGGTTTATGCTCCAATTTCTGAAAAAAACATGAGCATGATTATGAATGGGGGAGATTCAATGGTTTCAATTCTTCCTTCGGGATTTCTGATATCTGAAGATCACAGTGGTATAGTTGCTGAATCATCTAATAGACCAAGAGGCTCAGTGTTAACAATGGCTTACCAATTATTGATTTGTAGCAACAATAACACATCAATTCAAGATCAAAACAGGAAAACTGTGGTTAGAATTGTCGTCTCAGCACTCCAAAACATTAAGACTTCTTTGAAAATGTCTGAGGATTAG 1566 0.408 MSQPESSLASTLAETSLVKQECDISDPVHDFASSDSEMEAKRIAKVANLAMAELLKLMRINEPLWAKSSYGVPGYVLVRERYASMFPRVDSLNSPPHTTREESSKYCRVVRIRARKLVEMLLDSEEWVNHFPTIVSKSETVKVLDVGSLENRNGALQVVCEKMQAISPLVSSRELFFLRYCQQVTDGTWAIAHVSIDSIEGRVLDSPVRRLPSGCVIYQMNEEFSMVIWAEHVEVNERIATCSRGGFTRDNVAYGAERWLWALNRMCERFVWTSINSMPPQASPEEVKGFNARMRAMRFSNRMVQGFFGVLYKLRDGGLAQSLEENNTEIKISLRKNTTPGMPEGIIATAITCIRLPVPQQNVCSFFMEAKNRPKWDVLSGGFAVNEFSHFTMGGRNCISILKTYNRIEGDVLMFQDSYIDPMGSYMVYAPISEKNMSMIMNGGDSMVSILPSGFLISEDHSGIVAESSNRPRGSVLTMAYQLLICSNNNTSIQDQNRKTVVRIVVSALQNIKTSLKMSED 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00454 521 SUPERFAMILY Bet v1-like 324 483 - -
Gma09g00454 521 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 21 518 - -
Gma09g00454 521 SMART START_1 45 269 IPR002913 GO:0008289
Gma09g00454 521 SUPERFAMILY Bet v1-like 38 269 - -
Gma09g00454 521 Pfam START domain 47 269 IPR002913 GO:0008289
Gma09g00454 521 ProSiteProfiles START domain profile. 36 272 IPR002913 GO:0008289
Gma09g00454 521 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 21 518 IPR042160 -
Gma09g00454 521 Gene3D - 88 244 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00454 Gma-Chr9 4398625 4402268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00454 36 516 Homeobox Transcription Factor Family AT4G04890 32.869 6.88e-80 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00454 K09338 - gmx:102667038 995.342