Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00436 ATGGAAGCATACGGTGGTTTCATGATTGACGAGAAAGCCGTTAGGGTTGAGAACGCTTTCCTTGATTTCCTCAAAAGGTTCTCTTCTTCCCATCGGAACGAACTTTATTACGAAGCGGAGATCGAATTGATGAAGAGCAATGACTCCAACACCATGTTCGTCGATTTCGACCACGTCATCAGATTCAGCGACCTCCTCCAGCAAACCATTTCCGATGAATACTTGAGATTTGAACCTTATTTGAAGAACGCCTGCAAGCGGTTAGTTATGGATCTCAAGCCGTCAATTGTATCCGACGATAGTCCTGACAAGGACATCAACATTGCCTTCTATAACATGCCCATCGTTAAAAGGTTAAGGGAATTGGGTACATCAGAGATCGGAAGGCTTGTGTCTGTGACAGGAGTGGTGACGAGGACGAGTGAGGTTCGACCTGAGCTTCTCCAAGGAACTTTCAAGTGCCTAGAGTGCGGTGGTGTTATAAAGAATGTTGAACAGCAATTCAAGTATACTGAGCCAACAATCTGCACAAATGCTACCTGTAGCAATCGAACAAGGTGGGTACTGCTGCGCCAGGAGAGCAAATTTGCTGATTGGCAGAGGGTCAGAATGCAGGAGACGTCCAAAGAGATACCTGCAGGCTCCCTTCCTAGGTCATTGGATGTTATTCTTCGTCATGAGATCGTGGAACAGGCCAGGGCTGGCGACACGGTGATTTTCACAGGTACTGTAGTTGCTATACCTGACATAATGGCATTGGCATCTCCGGGAGAGAGATCAGAGTGCCGCCGTGATGCTTCTCAACGCAGGGGTTCTACGGCTGGAAATGAGGGTGTGAGTGGTCTTAAGGCTCTGGGAGTCAGAGACCTCAACTATCGTCTAGCTTTTATCGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAACAGAAAGAAGGATGCTGATGATGACAATCAACAGTTTACTGATCAGGAACTGGAAGAAATTAAACGAATGAGGAGCACTCCAGATTTTTTCACCAAACTTGTCGAAAGCATTGCTCCAACTGTTTTTGGTCATCCAGATATTAAGAGAGCTATCCTTCTTATGCTTTTGGGTGGTGTTCACAAATTTACTCATGAAGGCATCAACCTCAGAGGAGACATAAACGTTTGTGTTGTTGGAGATCCCAGCTGTGCAAAATCTCAATTTCTTAAGTATACTTCAGGCATAGTTCCAAGATCTGTGTATACATCTGGGAAATCATCATCTGCTGCTGGCTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGGGAGTTTTGTATTGAGGCTGGTGCTTTGATGCTTGCAGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATCAGAGATCAGGTTGCAATTCATGAGGCAATGGAACAGCAGACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTTAATGCTCGTACTTCCATTCTTGCTGCTGCCAATCCTGCTGGGGGACGCTATGATAAATCTAAACCACTTAAGTACAATGTGGCCCTCCCACCAGCTATACTTTCAAGGTTTGATCTTGTATATGTTATGATTGATGACCCAGACGATCAGACAGACTACCACATAGCTCATCATATTGTGAGAGTTCATCAAAAGCGTGAAGGTGCTCTTGCTCCAGCATTCACTACAGCAGAACTGAAGCGTTATATAGCTTATGCAAAAATTCTTAAACCAAAGCTTTCGCCAGATGCCAGAAAACTATTGGTAGACTCTTACGTTGCTCTCCGTAGAGGTGATACAAATCCTGGGAGTAGGGTTGCATATCGTATGACAGTTAGGCAGTTGGAGGCATTAATCAGATTGTCAGAGGCCATTGCACGGTGTCATTTGGACAATGAGGTACAACCTCGTCATGTTCGTCTAGCAGTAAAACTGCTGAAAACTTCCATCATAAGTGTGGAGTCCAGTGAGATTGATCTGTCTGAGTTTCAAGAAGAAAACCATGATGACGGTGCAGGTGGTGGCGATGGAAATGATAAAAATCGAGATGCTAATGATCAAGTGGGGAATGATGCAGCAGCTCAGCAAGCTGCCGGAAAtgctaatgatcaagtgggaaacgatgcaactcagcaaactgctaatgatcaagtgggaaatgatgcagctcagcaacctgctGGAAATAATGGAAATTCAGCAGATGGATCTAAACCCCAAGTGAGAAAACTCGTTATGAGTGATGAATATTATCAGAGAGTTACCAGCGCCCTTATCATGCGACTAAGACAGCATGAAGAGGCTGTTGTGCAAGGAAACGGTTTGTCTGGGATGAGGCAAAAAGATTTGATTCAATGGTACGTAGACCAACAAAATGAGAGAAACAACTACAGTTCGATGGAGGAGGTGCAAGCTGAAATTTCCAAAATTAAAGCTATTATAGAGAGCTTAATTCGGAGAGAGGGCCATTTGATAGTGGTAGATGATGGGCAAGCAGCAGCCGCAGCAGCAGAACCCCCAGGCGCACCAAGAAATTACCGAATTTTAGCAGTGGCTCCTAATTATGTCATTGATTGA 2586 0.4304 MEAYGGFMIDEKAVRVENAFLDFLKRFSSSHRNELYYEAEIELMKSNDSNTMFVDFDHVIRFSDLLQQTISDEYLRFEPYLKNACKRLVMDLKPSIVSDDSPDKDINIAFYNMPIVKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICTNATCSNRTRWVLLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVAIPDIMALASPGERSECRRDASQRRGSTAGNEGVSGLKALGVRDLNYRLAFIANSVQICDGRREIDIRNRKKDADDDNQQFTDQELEEIKRMRSTPDFFTKLVESIAPTVFGHPDIKRAILLMLLGGVHKFTHEGINLRGDINVCVVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKREGALAPAFTTAELKRYIAYAKILKPKLSPDARKLLVDSYVALRRGDTNPGSRVAYRMTVRQLEALIRLSEAIARCHLDNEVQPRHVRLAVKLLKTSIISVESSEIDLSEFQEENHDDGAGGGDGNDKNRDANDQVGNDAAAQQAAGNANDQVGNDATQQTANDQVGNDAAQQPAGNNGNSADGSKPQVRKLVMSDEYYQRVTSALIMRLRQHEEAVVQGNGLSGMRQKDLIQWYVDQQNERNNYSSMEEVQAEISKIKAIIESLIRREGHLIVVDDGQAAAAAAEPPGAPRNYRILAVAPNYVID 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00436 861 Pfam MCM P-loop domain 331 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 SUPERFAMILY Nucleic acid-binding proteins 20 249 IPR012340 -
Gma09g00436 861 Pfam MCM6 C-terminal winged-helix domain 746 860 IPR041024 -
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein family signature 472 485 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein family signature 496 508 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein family signature 384 399 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein family signature 444 458 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein family signature 523 531 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 10 814 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 CDD MCM6 346 652 - -
Gma09g00436 861 MobiDBLite consensus disorder prediction 691 740 - -
Gma09g00436 861 MobiDBLite consensus disorder prediction 664 689 - -
Gma09g00436 861 Gene3D - 8 115 - -
Gma09g00436 861 Pfam MCM AAA-lid domain 568 653 IPR041562 -
Gma09g00436 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 654 IPR027417 -
Gma09g00436 861 ProSitePatterns MCM family signature. 452 460 IPR018525 GO:0003677|GO:0005524|GO:0006260
Gma09g00436 861 ProSiteProfiles MCM family domain profile. 343 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 Pfam MCM N-terminal domain 18 112 IPR027925 -
Gma09g00436 861 Gene3D - 119 247 IPR012340 -
Gma09g00436 861 Gene3D - 323 671 IPR027417 -
Gma09g00436 861 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 10 814 - -
Gma09g00436 861 Pfam MCM OB domain 119 247 IPR033762 -
Gma09g00436 861 Gene3D - 146 197 - -
Gma09g00436 861 Coils Coil 803 823 - -
Gma09g00436 861 SMART mcm 115 654 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma09g00436 861 MobiDBLite consensus disorder prediction 664 741 - -
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 278 299 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 116 128 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 74 86 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 219 230 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Gma09g00436 861 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 166 183 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Gma09g00436 861 Gene3D - 743 861 - -
Gma09g00436 861 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00436 Gma-Chr9 4155270 4161391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00436 1 861 Core DNA Replication Machinery Family AT5G44635 69.308 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00436 K02542 - gmx:100794021 1634.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01446 15 13059396 13065765 Gma09g00436 09 4155270 4161391 GST