Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00431 ATGTTTGGTCAGAGCATGGATTCTGCAAGGGATGCTGCGGGTGGTGTGGCAGGGACAGTGCTAATTCCCATGCGTTTTGTGTGGCCATATGGAGGAAGGAGTGTGTTTCTCAGTGGTTCTTTCACACGGTGGTTGGAGCTTCTACCGATGTCGCCAGTGGAAGGTTGTCCAACTGTGTTTCAAGTGATTTATAACTTGCCACCCGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCATGATGAACATCAACCTTATGTACCTGGAGAATATGGGATAGTCAACACTGTCTTATTGGCCACTGATCCTAACTACATGCCTGTTTTACCTCCAGACGTTGCTTCTGGAAATAGCATGGATGTGGATAATGATGCTTTTCGCCGAATGGCCCGGTTGACCGATGGTACTTTGAGTGAGGTGCTGCCAAGAATATCAGATACTGATGTACAAATATCCCGTCAGCGTATTTCTGCATTTCTATCTTCACACACCGCTTATGAATTACTTCCCGAGTCAGGCAAGGTTGTTGCTTTGGATGTTGATCTACCAGTGAAACAGGCATTTCATATATTGCATGAGCAGGGAGTTTTCATGGCTCCTCTTTGGGACTTCTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTCGGATtttattttaattttaagagagCTGGGGAATCATGGATCCAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAATCGTATCTAAATAGACAGAACAATGGACATGGAACTGCATTTTCAAGATGTTTTATCCATGCAGGGCCATATGATAATCTGAAAGATATTGCCATGAAGATCTTGCAAAAGGAGGTTTCAACTGTTCCTATTATCCATTCATCTTCTGAAGATGCTTCATTTCCACAGTTACTACATCTTGCTTCACTTTCAGGAATACTTAAATGCATTTGTAGGTATTTTAGGCACTGCTCTAGTTCCTTGCCTGTACTTCAACTTCCAATCTGTGCAATACCTGTGGGCACGTGGGTGCCCAAAATTGGGGAATCAAATCGGCGGCCTCTAGCAATGTTGAGACCAACCGCTTCTCTTGCGTCAGCCCTAAATTTATTAGTTCAAGCCCAAGTAAGCTCAATACCAATAGTTGATGATAATGACTCATTATTGGATATATACTGTCGGAGTGACATAACAGCTTTGGCAAAGAACAGAGCATATACACATATTAATCTTGACGAAATGACTGTTCATCAGGCTTTGCAGTTGGGCCAGGACGCATATAGTCCCTATGAGCTTAGAAGTCAAAGATGTCAGATGTGTTTGCGTTCTGATCCTCTGCATAAAGTGATGGAACGCTTGGCAAATCCAGGTGTCAGGCGGCTTGTCATCGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATTGTTTCATTGAGTGACATATTCAAGTTCTTCATTGGTGGTTAG 1479 0.4314 MFGQSMDSARDAAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVFQVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVLLATDPNYMPVLPPDVASGNSMDVDNDAFRRMARLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVVALDVDLPVKQAFHILHEQGVFMAPLWDFCKGQFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLNRQNNGHGTAFSRCFIHAGPYDNLKDIAMKILQKEVSTVPIIHSSSEDASFPQLLHLASLSGILKCICRYFRHCSSSLPVLQLPICAIPVGTWVPKIGESNRRPLAMLRPTASLASALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKNRAYTHINLDEMTVHQALQLGQDAYSPYELRSQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFFIGG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00431 492 SUPERFAMILY CBS-domain pair 356 491 IPR046342 -
Gma09g00431 492 CDD E_set_AMPKbeta_like_N 23 101 - -
Gma09g00431 492 ProSiteProfiles CBS domain profile. 355 412 IPR000644 -
Gma09g00431 492 Gene3D Immunoglobulins 22 110 IPR013783 -
Gma09g00431 492 SUPERFAMILY E set domains 22 103 IPR014756 -
Gma09g00431 492 SMART cbs_1 177 226 IPR000644 -
Gma09g00431 492 SMART cbs_1 441 490 IPR000644 -
Gma09g00431 492 SMART cbs_1 359 407 IPR000644 -
Gma09g00431 492 ProSiteProfiles CBS domain profile. 437 492 IPR000644 -
Gma09g00431 492 Gene3D - 331 490 IPR046342 -
Gma09g00431 492 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 12 491 - -
Gma09g00431 492 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 12 491 - -
Gma09g00431 492 Gene3D - 148 330 IPR046342 -
Gma09g00431 492 Pfam Glycogen recognition site of AMP-activated protein kinase 22 104 IPR032640 -
Gma09g00431 492 Pfam CBS domain 444 489 IPR000644 -
Gma09g00431 492 Pfam CBS domain 357 403 IPR000644 -
Gma09g00431 492 ProSiteProfiles CBS domain profile. 171 233 IPR000644 -
Gma09g00431 492 SUPERFAMILY CBS-domain pair 158 328 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00431 Gma-Chr9 4105324 4114673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00431 - - gmx:100781819 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01439 15 13016673 13029108 Gma09g00431 09 4105324 4114673 GST
Gma17g00224 17 1840855 1848112 Gma09g00431 09 4105324 4114673 PCT
Gma09g00431 09 4105324 4114673 Gma17g00224 17 1840855 1848112 PCT