Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00426 ATGTTCAATAAACTTCTCTATCTGAAAGATGTCACTTTCACAGCAACATCACGTTACCCTTTTATCCACCACCACTCCCCATTACTATTTCCTCTGCGTTTCTACACAACGACCACTTCAAATTCACACTCATTCGCGGTATCCTACCTCATCCACAATTTTGGGTTCTCCCCTGAATCTGCTTCCAGAACTTGTGACTCCTACCGCATTTGTTTTCGGACCCCAGAAAAGCCTGACTCAGCAATCAGGTTCCTCAGAGACCACGGTTTCTCTAACTCCCAAATAAACAGTATGGTTAGAAGGGTACCATGGTTGCTTTCCTGCGACCCTTGCAAAAGAGTATTGCCCAAGTTTCAATTTTTACTCTCAAAAGGTGTTTCTAGCTCTACAATTGTTGACATAGTGAGTAAGTCCCCTGCAATACTGAGTCGAAGCCTGGAGAATACTATAGTCCCAAGCTATGATTTGGTATTTAGATTCTTGAAATCTGATGACCACACTATTTCTTGTTTGTTTGGTAATTGCATTTACTATGGCAGAAGAGATTACATCGAGCGCAACATCAGAGTTTTGCTTGATAATGGAGTGGGAGAAACAAACATTGCAAGATTGCTTCGGAACCGTTGTAGGGCGGTTTTCACCTCTGATATTCTTAAGGTGGTGGAGGAAGTAAAGGATCTGGGGTTTGATCCTTCAAAATCAGCTTTTGTTACAGCATTGCTTGCCCTAAAAAGTATGAGTCAAACCTCGTGGAAGGAGAAAGTTGGCGTCTATAAGAAATGGGGTTGGTCCGATGAAGCCTGTCTTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGGCATCCATTGACAAAATAAATACTGTGATGAACTTTTGGGTCAATCAGTTGGGCTGGGATTCTTTGGACCTTGTCCGATCTCCCAAGATTCTTGGGTTGAGTATGGAAAAAACAATCATTCCAAGGGCTCTTGTTGTCCAGTATTTAGTCGCGAAAGGCTTGAGGAAAAAGAGTGCCTGCTTTCATATCCCATTTGCTGTTTCCAAAAAGGCGTTTATGGAAAAGTATGTGATATGTTATAAGGAGGACGCACATCAACTATTAAAGCTGTACCAGGAAAAAAATAGTGTTCAAGGAAAAAATGAGGATTGTGCAGCATCTGGCAGTTATCAAGTGGTTAACTCATGA 1188 0.4192 MFNKLLYLKDVTFTATSRYPFIHHHSPLLFPLRFYTTTTSNSHSFAVSYLIHNFGFSPESASRTCDSYRICFRTPEKPDSAIRFLRDHGFSNSQINSMVRRVPWLLSCDPCKRVLPKFQFLLSKGVSSSTIVDIVSKSPAILSRSLENTIVPSYDLVFRFLKSDDHTISCLFGNCIYYGRRDYIERNIRVLLDNGVGETNIARLLRNRCRAVFTSDILKVVEEVKDLGFDPSKSAFVTALLALKSMSQTSWKEKVGVYKKWGWSDEACLEAFRRHPHCMLASIDKINTVMNFWVNQLGWDSLDLVRSPKILGLSMEKTIIPRALVVQYLVAKGLRKKSACFHIPFAVSKKAFMEKYVICYKEDAHQLLKLYQEKNSVQGKNEDCAASGSYQVVNS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00426 395 Pfam mTERF 82 276 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 Pfam mTERF 245 340 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 379 - -
Gma09g00426 395 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
Gma09g00426 395 Gene3D Transcription termination factor 3, mitochondrial 179 370 IPR038538 -
Gma09g00426 395 Gene3D Transcription termination factor 3, mitochondrial 64 178 IPR038538 -
Gma09g00426 395 PANTHER CGI-12 PROTEIN-RELATED 18 379 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00426 Gma-Chr9 4006217 4007404 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma09g00426 mTERF 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00426 K15032 - gmx:102663414 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01431 15 12890721 12892013 Gma09g00426 09 4006217 4007404 GST