Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00418 ATGAGCATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGAGCTATATCTTGTAATGAAATCCAAAGAACAAGCAGTTTCTCTTGGTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTAATAGGAGAAGAAATCCTTCCAAGTTTGGACTCTCCTAAATCGTTTCGTAGGGTGCCCTCTTCACCAAGTTTTCCAAAGTTGGACATGTTATCATCTTCTGTCAATAGTAGTTTGTCAAACCTAAGTTGCAGCCCATCCACCCCAAGTAATATGCTTGAATATGACCCTTTTACGTTAAGATCCATAAGTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGGCATGGAAGTTCAAGTTGCTGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAGATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGCACCCTTTATGACAGTATCATATCTTATTTTAACATGTTATACTGGGATTTGGAACCAGATTCCCTAAAAGCTTCTAACAATGAGAGTATGGGTGGATCCTTTCAATATAATTTTAATGATAGTCTTAATCTTCAGGAGCGTCAATCTCTGTCAAAAATTAAGGGAAACAATTCTAGTCTTGACTGTTTTGCAAACAATATTCCACATTCCAAGTCGAAAGCATCTCCTAAATCATTTTCACAAACTACAGTACTTGATGGCCTCCAACATGTTCTTAGTCAGGCTGAGAATGATTTCCTATACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCGATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGATTTGTACACACTTAATCTAGGCGACAGTAGAGCAGTGTTGGCAACATGCATCACAGATAACAGTTTGAATGCGAATGAGAGATTGAAGGCTATCCAACTTACAGAGAGTCACACTGTTGACAATGAAGCTGAAAGAGCTCGACTTCTTGCTGATCATCCTGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACAAGAGCTTTAGGAGTGGGCTACCTGAAAAAGAAAATTCTGAATGACGCATTGATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCGCCATATGTTTCTACTGATCCATCATTGAATGTGCACAAAATCTCAGATTCTGATCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAACCCTTTTGGTGATCCAGCAAAATTTCTTATTGAGCAACTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCATGGAAGAGTTGATGAATGTTCCGGATGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTAATGGTGATCATCCTTGGGATGAATCAACGGACTTCAAAAGCATCAATTTGCCTCTAG 1554 0.4041 MSMLSPEGELKISFGYQCNSDRAISCNEIQRTSSFSWLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRRVPSSPSFPKLDMLSSSVNSSLSNLSCSPSTPSNMLEYDPFTLRSISAPSRSEGFLNGMEVQVAGGAAGEDRVQAVCSEEDGWLFCAIYDGFNGRDAADFLAGTLYDSIISYFNMLYWDLEPDSLKASNNESMGGSFQYNFNDSLNLQERQSLSKIKGNNSSLDCFANNIPHSKSKASPKSFSQTTVLDGLQHVLSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCITDNSLNANERLKAIQLTESHTVDNEAERARLLADHPDDPKTIVAGKVKGKLKVTRALGVGYLKKKILNDALMGILRVRDLKSPPYVSTDPSLNVHKISDSDQFVIVGSDGLFDFFSNDEAVQLVESYILRNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPDGRRRKYHDDVTVMVIILGMNQRTSKASICL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00418 517 SMART PP2C_4 120 502 IPR001932 -
Gma09g00418 517 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 3 516 - -
Gma09g00418 517 Gene3D - 117 513 IPR036457 -
Gma09g00418 517 PANTHER PROTEIN PHOSPHATASE 2C 3 516 IPR015655 GO:0004722|GO:0006470
Gma09g00418 517 CDD PP2Cc 142 504 IPR001932 -
Gma09g00418 517 SUPERFAMILY PP2C-like 142 505 IPR036457 -
Gma09g00418 517 Pfam Protein phosphatase 2C 242 459 IPR001932 -
Gma09g00418 517 ProSiteProfiles PPM-type phosphatase domain profile. 130 504 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00418 Gma-Chr9 3926589 3930416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00418 6 514 PP2C-type Phosphatase Gene Family AT3G16560 61.260 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00418 - - gmx:100791404 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00418 09 3926589 3930416 Gma09g00418 09 3926589 3930416 ECH
Gma17g00240 17 1951880 1953995 Gma09g00418 09 3926589 3930416 PCT
Gma09g00418 09 3926589 3930416 Gma17g00240 17 1951880 1953995 PCT