Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00412 ATGTCTTCTTCTTTTTCACCTTCTTGGTTAACTTCTCCTTCATGTTCCGCTTTGGACATAGATTCATCTTCCCCTACTGCGTTACTCATAGTTCAGTGGTTGAGGTTTATTCTTCTATCTCCATGTCCACAAAGAGTTCTTCTTTCTGCTGTTGATTCAATCTTCTTGCTCTCTCTCTTAGCCTTTGCAGCAGTTAAACTCTATTCCCGATTCACTTCTAACACCACCTCCAACAACACCATCACCAAACCCCTTCTGCAAGACAAAGACTCTGACTACAAAGTCACCTTCTGGTTCAAACTACCCCTCTTGGTAACTACCCTTTTGGCCATAGCTTACACTGTTCTAAGCATCTTGGCCTTCACTCAAACGAGCCTCTCGTCATGGAAACTCATAGAGGCTCTTTTTCGCCTCTTTCAGGCGGCGTCCAACAtagtggtggcgatcctaatggctcatgagaagaagttcaaagcttccaagcaccctttgtcgctgagaatctattggattgcgaacttgatggtttcgtgcttgttcgccacctcggccattgttcgattgataaccatcgatgtagcgaaagttgagctttgtttgagggtggacgacgtgttctcgttggttaaccttccactttctgcgttccttttcctagtagcaatgaaagggtcaaccgggattcaagtgatcagaatttctgatgtagtgacaacatatcagtccctttacagtgacagaactttgagcccttatgcatattcttcgttcttctccaaaacagtgtggctttggatgaaccctttgctgaataaagggtaccaaacacccctcaagcttgaagatgtgccttcacttcctattgatttcagagcagagaaaatgtcagagcttttccatagaaattggccaaagccagaggaaaacagcaagcacccggttggactaaccttgttcagatgcttctggaagcacatagccttcactggcttccttgcaattataaggcttggagttatgtacattggtccaatgcttattcagagtttcgttgatttcacttcaagaaaagacagcaccccctatgaaggccttgttctgatactggtcctgtatttggcaaaatcaaccgaagtcctctctgtgcaccaattcaatttccactctcagaagctcggcatgctcattcgttccagcctaatcacttctatctacaaaaaaggtctgagattgtcgagctcttcaaggcaggctcacgggaccggacagattgtgaaccacatgtctgttgacgcacaacagctcgcggatttgatgatgcagtttcaccccatatggctcatgcccctgcaggtaactacagctctggtccttatctacagcaacattggcgtgtcggctttcgcggcgctgcttggatcgagtattgtgtttgttttcactctcttccggacaaagagaaccaacagctttcagtttatgataatgaagagccgtgacttgaggatgaaggcaactaatgaattgttgaacaacatgcgtgtcatcaagtttcaagcctgggaggagtactttggcaacaagattggcaagtttcgcgaagcggaacatggttggattgggaaattcttgtactactttgctgttaacatgggggttctgagctctgctccgttgttggtaactgttctcacgtttggaagtgctactcttcttggtgttcctctgaatgctggcactgtatttacaatcacttcagtcatcaagattctgcaggagcccgtgaggaccttccctcaggctctcatcgtcatttcgcaggcgatgatttctctcgggaggctggatgagttcttgatgagcaaggaaatggatgagggagcagtggagagagtcgagggctgcaacggcagcgacacggccgtggagatcaaggatggcgaattctcgtgggacgatgtagatgggaatgcggctctgagagttgaagagatggaaatcaagaaaggggaccatgctgctgttgtgggagctgttggctctggcaagtcttccttgttggcttctgtgttgggggaaatgttcaagATATCAGGAAAGgtcagagtttgtgggtcaatagcctatgtagcccagacatcatggattcagaatgcaaccatccaagacaacatattgtttggtttaccaatgaacagagagaagtacagggaagccataagagtgtgctgcttggaaaaggatcttgaaatgatggaacatagagaccagactgagattggagaaaggggtattaatctcagtggtggccagaagcaacgtgtacaacttgctagagctgtgtaccaagactctgacatctatctccttgatgatgtattcagtgctgttgatgcacaaactggatcatttatttttaagGAATGTATTATGGGAGCTCTCAAAAATAAGACCATAATACTTGTAACCCACCAAGTGGACTTCTTGCATAATGTTGACTGTATAATGGTAATGCGAGAAGGGAAAATCGTGCAAAGTGGCAAGTATGATGAACTTCTCAAAGCAGGCTTGGATTTTGGTGCACTTGTGGCTGCTCACGAATCCTCTATGGAGATTGCAGAGTCTAGTGATAGAGTTGGTGAAGATTCTGCTGAGTCTCCAAAACTTGCTCGGATCCCTTCAAAAGAAAAGGAAAACGTGGGCGAAAAGCAACCTCAAGAAGAATCCAAGTCAGATAAGGCTTCAGCAAAGCTCATTGAAGACGAAGAAAGGGAAACCGGTCGTGTGGACCTCAAAGTGTATAAACACTATTTCACTGAAGCATTTGGGTGGTGGGGTGTTGCACTGATGCTGGCAATGTCTCTAGCATGGATTTTATCCTTCTTGGCTGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGATAGTGCCTTTCCTCCTTCTACATTCATCATTGTCTATGCTTGCATAGCAGGTCTTGTATGTACTGTGGTGATGATCAGATCAGTCTTATTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTCAGTGGAATGCTTGAAAGCATCTTGCATGCACCAATGTCATTCTTTGACACAACTCCCTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGGTTGATATCTCAATTccaatgttggtgaacttcgtcatggttgcttacttctcagtaaccagcatcctcattgtaacatgccaaaatgcttgggaaacggtcttcctcttaatcccactgttctggctgaataactggtatcggaaatattaccttgcatcttctcgggaattgactcgccttgattccatcaccaaagctcctgtgattcaccatttttcagaaaccattgctggtgttatgaccatacgcggcttcagaaagcagaacgcattttgtcaagaaaatattgacaaagtgaatgctagtctgagaatggatttccacaacaacggtgctaatgaatggcttggttttcgcttggactatatgggagtgattttcctttgctttgccactatttttatgatctttctgccaagtgctattattaagccagAATATGTTGGTTTGTCTTTGTCCTATGGCCTGGCTCTCAGTAGTCTCTTGGCATTTACCATAAGCATGACTTGTTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCTCCAGCCTTCCCTCAGAAGCTCCATGGAAAATTGCTGACAAAACTCCTCCTCAGAATTGGCCCAGTCAAGGCATTATTGAGTTAACCAATTTGCAGGTTCGGTATCGACCAAATACTCCTCTGGTTCTCAAGGGAATCTCTCTCACCATTGAAGCaggagaaaagattggtgttgttggtcgtacaggaagtgggaaatcaaccctcattcaggtgttatttaggttgattgagccttcagctgggaaaataactgttgatggaatcaacatttgcaccctgggccttcatgatgtgaggtctagatttggaattattcctcaagagcctgtcctctttcaaggaacagtacgaagcaacattgacccccttggactgtattcagaggaagaaatttggaagAGTCTTGAGCGCTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCAGAGAAACTTGAGGCTCCAGtggttgatggtggagacaattggagtgtggggcaaagacagcttctttgcttgggaaggatcatgctaaaaagcagcaaaatattgttcatggatgaggcaacagcatccgttgattcgcaaactgacgctgtgatacaaaagatcatccgtgaggactttgcggatcgtacaattatcagcattgctcatagaataccaacagtcatggattgtgacagggttttagtcattgatgcagGCTATGCAAAGGAATATGACAAGCCATCGCGTTTGCTAGAAAGGCATTCACTTTTTGGAGCATTGGTTAAGGAGTACTCTAATAGATCAGCTGAACTAGAGGCTTAG 4521 0.1566 MSSSFSPSWLTSPSCSALDIDSSSPTALLIVQWLRFILLSPCPQRVLLSAVDSIFLLSLLAFAAVKLYSRFTSNTTSNNTITKPLLQDKDSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQTSLSSWKLIEALFRLFQAASNIVVAILMAHEKKFKASKHPLSLRIYWIANLMVSCLFATSAIVRLITIDVAKVELCLRVDDVFSLVNLPLSAFLFLVAMKGSTGIQVIRISDVVTTYQSLYSDRTLSPYAYSSFFSKTVWLWMNPLLNKGYQTPLKLEDVPSLPIDFRAEKMSELFHRNWPKPEENSKHPVGLTLFRCFWKHIAFTGFLAIIRLGVMYIGPMLIQSFVDFTSRKDSTPYEGLVLILVLYLAKSTEVLSVHQFNFHSQKLGMLIRSSLITSIYKKGLRLSSSSRQAHGTGQIVNHMSVDAQQLADLMMQFHPIWLMPLQVTTALVLIYSNIGVSAFAALLGSSIVFVFTLFRTKRTNSFQFMIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIGKFREAEHGWIGKFLYYFAVNMGVLSSAPLLVTVLTFGSATLLGVPLNAGTVFTITSVIKILQEPVRTFPQALIVISQAMISLGRLDEFLMSKEMDEGAVERVEGCNGSDTAVEIKDGEFSWDDVDGNAALRVEEMEIKKGDHAAVVGAVGSGKSSLLASVLGEMFKISGKVRVCGSIAYVAQTSWIQNATIQDNILFGLPMNREKYREAIRVCCLEKDLEMMEHRDQTEIGERGINLSGGQKQRVQLARAVYQDSDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTIILVTHQVDFLHNVDCIMVMREGKIVQSGKYDELLKAGLDFGALVAAHESSMEIAESSDRVGEDSAESPKLARIPSKEKENVGEKQPQEESKSDKASAKLIEDEERETGRVDLKVYKHYFTEAFGWWGVALMLAMSLAWILSFLAGDYWLAIGTAEDSAFPPSTFIIVYACIAGLVCTVVMIRSVLFTYWGLKTSQSFFSGMLESILHAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMVAYFSVTSILIVTCQNAWETVFLLIPLFWLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNAFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVIFLCFATIFMIFLPSAIIKPEYVGLSLSYGLALSSLLAFTISMTCSVENKMVSVERIKQFSSLPSEAPWKIADKTPPQNWPSQGIIELTNLQVRYRPNTPLVLKGISLTIEAGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKITVDGINICTLGLHDVRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEAPVVDGGDNWSVGQRQLLCLGRIMLKSSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGYAKEYDKPSRLLERHSLFGALVKEYSNRSAELEA 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00412 1506 CDD ABCC_MRP_domain1 642 842 - -
Gma09g00412 1506 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g00412 1506 Pfam ABC transporter transmembrane region 977 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g00412 1506 Pfam ABC transporter 664 793 IPR003439 GO:0005524
Gma09g00412 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g00412 1506 Gene3D - 1245 1495 IPR027417 -
Gma09g00412 1506 SUPERFAMILY ABC transporter transmembrane region 944 1242 IPR036640 GO:0005524|GO:0016021
Gma09g00412 1506 SMART AAA_5 1288 1472 IPR003593 -
Gma09g00412 1506 SMART AAA_5 669 842 IPR003593 -
Gma09g00412 1506 SUPERFAMILY ABC transporter transmembrane region 316 619 IPR036640 GO:0005524|GO:0016021
Gma09g00412 1506 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Gma09g00412 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma09g00412 1506 Gene3D ABC transporter type 1, transmembrane domain 909 1243 IPR036640 GO:0005524|GO:0016021
Gma09g00412 1506 Gene3D ABC transporter type 1, transmembrane domain 313 619 IPR036640 GO:0005524|GO:0016021
Gma09g00412 1506 Gene3D - 620 885 IPR027417 -
Gma09g00412 1506 CDD ABC_6TM_ABCC_D2 943 1237 IPR044726 GO:0140359
Gma09g00412 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 865 IPR003439 GO:0005524
Gma09g00412 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Gma09g00412 1506 ProSitePatterns ABC transporters family signature. 767 781 IPR017871 GO:0005524
Gma09g00412 1506 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 62 1502 - -
Gma09g00412 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 62 1502 - -
Gma09g00412 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1495 IPR027417 -
Gma09g00412 1506 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Gma09g00412 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 861 IPR027417 -
Gma09g00412 1506 MobiDBLite consensus disorder prediction 873 921 - -
Gma09g00412 1506 CDD ABCC_MRP_domain2 1260 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00412 Gma-Chr9 3865254 3875437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00412 642 854 Calmodulin-binding Proteins AT2G36910 30.837 7.26e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00412 - K05665 gmx:100804807 2919.03