Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00407 ATGGAAGGTAACAAGGACGAAGCATTACGCTGCGTTCGCATCGCCGAAGAAGCCATCGCGTCGAGAAACAAAGACCGCGCCCTCAAATTCCTCAAAATCGCGCAACGTCTCAACCGCGATTTGCCCCTCCAATCCCTGCTCGACAAGTGCAACCGCCTCGATTCTCACACCGCCTCCACCGCAGGCGGCAGCGGCGCCTCTCTGGCGAACGGCCACTCTCCTCGTCGCGAGGGCTTAGACGTGGAAAGAAATTACACGGAGGAAAACGTGCACTTAATTAGGGAAATCAAAGGAAAGAGCGATTATTACGCGATTCTAGGATTAGAGAAGAGTTGCTCCGTGGAAGAGATTCGAAAAGCGTATCGGAAGCTCTCTCTCAAAGTTCATCCCGATAAGAACAAAGCTCCAGGCTCCGAAGACGCGTTCAAGAAGGTTTCCAAGGCTTTCAAGTGTTTGAGCGACGACGGTTCCAGAAGGATGTACGACCAAACCGGAACCGCCGCCGACGATTTCGAGAGCACCGAGGTAAACACGTTCCGGCGTAGAAGAAGAAGAACGGCGACGACGCGCGATTTCTTCGAAGACGAGTTCGATCCGGACGAGATATTCAGGGCGTTCTTCGGACACTCCGACGTGTTCGGAAGAAACAACCACGTTTACCGAACCCGCGGCGGGATGGGGAATCCGAATCATCAGCATAGGCATGAATTCAATGCTGGAGGATCGGGAGGGAGGCATCACAATGTGATGCTTCTGATTCAGCTCTTGCCGTTTTTGATTATTGTGCTGCTCGCGTACTTGCCGTTTTCGGAGCCTGAGTATTCCTTGCACAAGCATTACAGCTACCAGATTCCGAAGACCACGGATCGGCACGGGGTTCAGTTCTTCGTGAAGTCGGCGGCGTTTGATGTGAATTATCCGCCCGGGAGTGATGCTCGTGAGGCAGTTGAGGAGAGTGTGATGAAGGATTATAGGAGTATGCTGAGAAGATACTGTCAGGTGGAGATGCAGAGACGGAGCTGGAATAGGAATCTGCCAGCTCCTCACTGTGATAAGCTGCATAACTTTGCAGTGATGGCATGA 1083 0.5254 MEGNKDEALRCVRIAEEAIASRNKDRALKFLKIAQRLNRDLPLQSLLDKCNRLDSHTASTAGGSGASLANGHSPRREGLDVERNYTEENVHLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTAADDFESTEVNTFRRRRRRTATTRDFFEDEFDPDEIFRAFFGHSDVFGRNNHVYRTRGGMGNPNHQHRHEFNAGGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYSYQIPKTTDRHGVQFFVKSAAFDVNYPPGSDAREAVEESVMKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKLHNFAVMA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00407 360 MobiDBLite consensus disorder prediction 58 79 - -
Gma09g00407 360 PANTHER AT29763P-RELATED 1 358 - -
Gma09g00407 360 PANTHER CHAPERONE PROTEIN DNAJ 49 1 358 - -
Gma09g00407 360 SUPERFAMILY Chaperone J-domain 97 212 IPR036869 -
Gma09g00407 360 ProSiteProfiles dnaJ domain profile. 101 165 IPR001623 -
Gma09g00407 360 Pfam DnaJ domain 101 162 IPR001623 -
Gma09g00407 360 Gene3D DnaJ domain 98 219 IPR036869 -
Gma09g00407 360 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Gma09g00407 360 PRINTS DnaJ domain signature 103 121 IPR001623 -
Gma09g00407 360 PRINTS DnaJ domain signature 121 136 IPR001623 -
Gma09g00407 360 PRINTS DnaJ domain signature 137 157 IPR001623 -
Gma09g00407 360 PRINTS DnaJ domain signature 157 176 IPR001623 -
Gma09g00407 360 CDD DnaJ 101 154 IPR001623 -
Gma09g00407 360 SMART dnaj_3 100 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00407 Gma-Chr9 3818158 3824224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00407 4 162 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.994 2.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00407 K09518 - gmx:100789271 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00407 09 3818158 3824224 Gma09g00407 09 3818158 3824224 ECH