Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00374 CCGCCGGCCGCGGCGGCCGAGGAGATTTCCTCGGTCCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCCAAAGCCGCCATCGTCTCCGTCTCTCGGCCCGACGCCAGCGACATCAGCCCCATGCAACTCTCTTACACAATTCAGGTTCAGTACAAACAGTTCAAGTGGGAGCTAACAAAGAAAGCCCATCAAGTATTTATTTTGCATTTCGCGCTAAAGAAACGTGCTTTTATTGAGGAAATCCACGAGAAACAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTGCTATGGCGCAAGATGACGACGAAGGTGATGATGAGACTGTCCCATTGCATACTGAAGAAACTCATGAAAGTGCCAAGGACAGAGATGTTCCATCTAGTGCTGCTCTGCCAATTATACGGCCAGCCTTGGGAAGACAGCATTCTATTGCAGACAGGGCAAAGAGAGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCGTGAGGTTTGCAAGTTCTTGGAGGTATCGAAGTTATCTTTTTCACCTGAATATGGTCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTACCCAAAATCCAGAAGGATGATGATTCCAGGAAGTGTTGTTTGTCTGACTGTTTTAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTCGATACACAGCCTCTAGACATCATTGTTTTTGATGTACTGCCTGCCTCAGATGGGAATGGGGATGGTCGACTATCGCTGGCGAGTGAAATGAAGGAACGAAATCCTTTACGTCATTCATTCAAGGTGACTTGTGGAATCCGGAGCATCAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGATTGGGTTGCTGCAATTAACGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCCTAGTTGAAGACGGAAGTCAAGCCCAGTGGTTCATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTTTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCACACTCATGCTTCGTCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAAAAACTAGTCATTATTGATAACCATATTTGCTTTATTGGAGGACTTGATTTGTGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAACCTGGCCTGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTAGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCAGAGAGATACAGATTGAAAGTAGGAACACTGACAATCATAGAGTTCTCAAGAGAGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAATTGAATGGGGTAATCTCCTTTTCACATCACCTTGACAAGCCAAGAAGGATCAGCAGTGGTCTTCCGTTCTCGTTCCGGAAGGCCAAAATTGTAGCAGTTGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGGTCTTGAGAAAATGTCTCTGGATAGAGTGGCTCATTTTGATTTACAAAGTACAAAGCCACAATGGTGGGAAACGCAAGAACGGGGTGACCAAGGAGGTTTTGCTGAAGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAAGTTATTAGGAGTGTGAGTCAATGGTCTGCTGGAACAAGTCAAACCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAGTTGTCATACCTCTCCTGCCTGGCTTCCAGGGCGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCCGAGGGCAGAATTCTATCATGCATAATCTTTATGAACTTCTTGGTTCTAAAATACATGACTACATCTCTTTTTATGGCCTAAGGTCTTATGGTAGACTCTCTAATGGTGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATTACTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGGTATAGTTTTAGAAGACAGAGAGTTTATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTTTCCTTGACCCTCCGATTGTCATTATGGTCTGAACACTTGGGTCTCCCTATAGGAGAGGTCAATCAAATAATGGACCCAGTCGTTGAATCTACTTACAGGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAGTGTGGCTTTCTGGAAAGAAAGAATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATTATGACGGAGGCATTACAAACACCGATCCCTTGGAGAGATTAGCATCAGTGAAGGGTCATCTCGTTTCCTTTCCCTTGGAATTCATGTGTCAGGAAAGTCTAAGACCTGCTTTTAATGAAAGCGAATACTACGCTACTCAAGTTTTCCATTGA 3300 0.4339 PPAAAAEEISSVPSFRHSGAEANRIFEELPKAAIVSVSRPDASDISPMQLSYTIQVQYKQFKWELTKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTAMAQDDDEGDDETVPLHTEETHESAKDRDVPSSAALPIIRPALGRQHSIADRAKRAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIAFSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLTWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSREIQIESRNTDNHRVLKREDSFSSSSQDQDIPLLLPQESDGLDTHEGDQKLNGVISFSHHLDKPRRISSGLPFSFRKAKIVAVGPDTPMKGFVDDLDSEHGLEKMSLDRVAHFDLQSTKPQWWETQERGDQGGFAEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIMHNLYELLGSKIHDYISFYGLRSYGRLSNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIGIVLEDREFIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPIGEVNQIMDPVVESTYRDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSVAFWKERIGHTTIDLGIAPEKLESYYDGGITNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00374 1099 Coils Coil 81 101 - -
Gma09g00374 1099 MobiDBLite consensus disorder prediction 603 619 - -
Gma09g00374 1099 Pfam Phospholipase D Active site motif 463 490 IPR001736 GO:0003824
Gma09g00374 1099 SMART PH_update 202 330 IPR001849 -
Gma09g00374 1099 SMART pld_4 463 490 IPR001736 GO:0003824
Gma09g00374 1099 SMART pld_4 896 923 IPR001736 GO:0003824
Gma09g00374 1099 CDD PH_PLD 179 326 - -
Gma09g00374 1099 MobiDBLite consensus disorder prediction 603 641 - -
Gma09g00374 1099 Gene3D Endonuclease Chain A 350 586 - -
Gma09g00374 1099 PIRSF PLD_euk 7 601 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gma09g00374 1099 PIRSF PLD_euk 593 1099 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gma09g00374 1099 SUPERFAMILY Phospholipase D/nuclease 736 947 - -
Gma09g00374 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 463 490 IPR001736 GO:0003824
Gma09g00374 1099 MobiDBLite consensus disorder prediction 123 137 - -
Gma09g00374 1099 SUPERFAMILY PH domain-like 234 326 - -
Gma09g00374 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 896 923 IPR001736 GO:0003824
Gma09g00374 1099 Gene3D - 231 328 IPR011993 -
Gma09g00374 1099 Pfam PLD-like domain 769 943 IPR025202 -
Gma09g00374 1099 CDD PLDc_vPLD1_2_yPLD_like_2 756 940 - -
Gma09g00374 1099 MobiDBLite consensus disorder prediction 111 138 - -
Gma09g00374 1099 SUPERFAMILY Phospholipase D/nuclease 314 583 - -
Gma09g00374 1099 PANTHER PHOSPHOLIPASE D 16 1096 IPR015679 -
Gma09g00374 1099 CDD PLDc_vPLD1_2_yPLD_like_1 356 500 - -
Gma09g00374 1099 Gene3D Endonuclease Chain A 720 956 - -
Gma09g00374 1099 PANTHER PHOSPHOLIPASE 16 1096 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00374 Gma-Chr9 3507682 3520122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00374 2 980 Phospholipase D Gene Family (Wang group) AT3G16785 73.320 0.0 1390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00374 K01115 - gmx:100782187 2227.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00374 09 3507682 3520122 Gma09g00374 09 3507682 3520122 ECH