Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00358 ATGGCCTTGCATGTCCACAGCTTCTTCTATTTTTGGTTCGTCGTCATGATCTTCGTCGTCGTATTTTTCACGGCACCGTCGGTGTCTCAGCCGCAAGCCACCGGGTCCTGCAACGGGATACTCCTGTCGTACGCGTATACCGGCGGCTTGCAGCTGCCTCCGAATGTCTCGGACCCGGCGGAGCAGCCGTACCGGTTCTCCTCGACATTGACGGTGCTGAACAACGGGCTGGAGGAGCTGAGGTCGTGGAGGGTGTTCGTGGGGTTTCAGCACGGCGAGTGGCTGGTGTCCGCCTCGAACGCGGTGCTCGCCGACGGCACGAGCCTCCCCGGTTCGGTGGAAAACGGCACCGTTTTGAGTGGTGAAACCGTGAGGGATCTGAAGACTGCGGTGGCGACCGCCGGGGACTTGAATCAGATGCAGGTGAGGGTAGACATGGTGGGGACCTTGCTTGGAGTGGCGCCACCCTCTGTGCCAATGCCTTCTTCTGTTACCTTGGCTAACGATGGATTCTTGTGTGGTCAACCCTCTGGTCAAGGGAGCAATGAAACTCATGTGTGTTGCACAAGCGACCCCAATTTCAAAACAAACATAACCACAGAAGAAGAGTTCCTACCCAGGCAAAAGGGTGACCTTAGCATCACATACGACATCATCAGAACCTATGACTCCGATTACTGGGCAGAGGTCACAATTGCAAACCACAACCCCTTAGGTCGTCTTGATAACTGGAGACTAAGCTGGGACTGGAACAACAACGAGTTCATCCACACAATCAAAGGTGCATATCCCTTAAACGTGGATTCCTCTGACTGTGTCTTCGGTCCACAAGGCCTGTTCTACAAGGAACTCGACTTCTCCAACGTGTTAAACTGCGAAAGAAGACCAACCATAGTTGATCTTCCTCCCACAATGTTCAACAACACAGACTTCGGTAAAATCCCGTTTTGTTGTAGGAATGGTACTATCTTGCCACCGACAATGGACCCTAGTTTGTCATCTTCAAGGTTCCAAATTCAGGTTTTCAAAATGCCACCGAACCTTAACCGTTCCAAGCTTTCACCACCTCATAATTGGGAGATAAAGGGTACCCTTAACCCTGATTATGCATGTGGGAACCCTATTAGGGTTAGTCCTAGTGAATCTCCTGATCCAACACACCCACCATCGAACAAATCCGCGATTGCAAGCTGGCAAGTGGTTTGTAACATCACAAACACAAAACGAGAAGCACGTAAATGCTGTGTTTCTTTCTCAGCTTATTACAATGAATCGGTTGTTCCATGCAACACGTGTGCATGTGGATGTAGTAACCCTGAGAGAACGTGTAGTGCAACCTCACAAGCAATGCTGCTTCCACCAGAGGCACTTCTTGTACCTTTCCAGAACAGAACCGAGAAGGCACGTGCTTGGGCTGAGATACAACACTTGAATGTCCCTAACCCTTTTCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACTTGGTGACGGATCACCGGAGCGGTTGGAGTGCAAGGATCACACTCTTCAACTGGGGTGAAGCCAGTTTTGCTGATTGGTTCGCCGCGGTGCGAATGGAGAAGGCTGCAAAGGGGTTTGAGGAGGTGTATTCTTTTAATGGAAGCCTTTTGGATGGTGTGGATGGCACGATATTCATGCAAGGGAAGAAAGGGTTGAACTTTCTTGTGGCGGAGACGGATGGATCTAACCCTCGGAGAGATCCCAGGGTGCCCGGGAAACAGCAATCGGTGATCTCTTTTACAAAGAAGAATACTCCTGGAATCGATGTGGTTGGTGGTGATGGTTTTCCTAGTAAGGTTTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCAGTGGTTCCAAGCAGTGGTACTAGAATGGAGGTTTCATTGGCTACTATGATGTTCTTGGTTCTGTTTTTGTGGATTCTCTTCATGCGGCAATAG 1953 0.5008 MALHVHSFFYFWFVVMIFVVVFFTAPSVSQPQATGSCNGILLSYAYTGGLQLPPNVSDPAEQPYRFSSTLTVLNNGLEELRSWRVFVGFQHGEWLVSASNAVLADGTSLPGSVENGTVLSGETVRDLKTAVATAGDLNQMQVRVDMVGTLLGVAPPSVPMPSSVTLANDGFLCGQPSGQGSNETHVCCTSDPNFKTNITTEEEFLPRQKGDLSITYDIIRTYDSDYWAEVTIANHNPLGRLDNWRLSWDWNNNEFIHTIKGAYPLNVDSSDCVFGPQGLFYKELDFSNVLNCERRPTIVDLPPTMFNNTDFGKIPFCCRNGTILPPTMDPSLSSSRFQIQVFKMPPNLNRSKLSPPHNWEIKGTLNPDYACGNPIRVSPSESPDPTHPPSNKSAIASWQVVCNITNTKREARKCCVSFSAYYNESVVPCNTCACGCSNPERTCSATSQAMLLPPEALLVPFQNRTEKARAWAEIQHLNVPNPFPCGDNCGVSINWHLVTDHRSGWSARITLFNWGEASFADWFAAVRMEKAAKGFEEVYSFNGSLLDGVDGTIFMQGKKGLNFLVAETDGSNPRRDPRVPGKQQSVISFTKKNTPGIDVVGGDGFPSKVFFNGEECSLPSVVPSSGTRMEVSLATMMFLVLFLWILFMRQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00358 650 PANTHER COBRA-LIKE PROTEIN 7 1 649 - -
Gma09g00358 650 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
Gma09g00358 650 SUPERFAMILY Carbohydrate-binding domain 208 257 IPR008965 GO:0030246
Gma09g00358 650 PANTHER COBRA-LIKE PROTEIN 7 1 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00358 Gma-Chr9 3374486 3377119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00358 37 633 COBRA Gene Family AT4G16120 63.682 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00358 - - gmx:100778971 1330.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00358 09 3374486 3377119 Gma09g00358 09 3374486 3377119 ECH
Gma15g01352 15 12087944 12088333 Gma09g00358 09 3374486 3377119 GST
Gma17g00283 17 2290822 2293852 Gma09g00358 09 3374486 3377119 PCT
Gma09g00358 09 3374486 3377119 Gma17g00283 17 2290822 2293852 PCT