Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00356 ATGTCGCTGAGGCCGAATGCTAGAACCGAGGTTCGCCGCAACCGCTACAAGGTGGCGGTGGACGCCGACGAGGGTCGCCGGAGGAGGGAGGACAACATGGTGGAGATCCGCAAGAGCAAGCGCGAAGAGAGCCTCCAGAAGAAGCGCCGCGAAGGCCTCCAAGCTCAGCAGCAGTTCCCCACTCCTCTCCAAGCCGCCTCCATTGTCGAGAAAAAGTTAGAGAGTCTTCCTGCGATGGTTGCTGGAGTGTGGTCCGATGATAACAGCCAGCAACTGGAAGCGACCACGCAGTTTCGGAAACTGCTTTCGATTGAGCGCAGTCCTCCAATTGAGGAAGTTATTCAAGCTGGGGTTGTGCCTCGATTTGTGGAGTTTCTTGTTAGGGAGGATTTCCCTCAACTTCAGTTTGAGGCTGCGTGGGCTCTCACAAACATAGCATCTGGAACTTCTGAGAATACCAAGGTGGTGATTGATCATGGGGCAGTTCCGATATTTGTCAAGCTACTTAGTTCGCCCAGTGATGATGTTCGGGAGCAGGCAGTGTGGGCATTGGGGAATGTTGCTGGTGACTCTCCTAAGTGTCGTGATCTTGTTCTCAGCCATGGTGCCCTGATCCCACTGTTGGCCCAGTTGAATGAACATGCAAAACTTTCAATGTTGAGAAACGCGACATGGACCCTGTCAAACTTCTGCAGGGGCAAGCCACAGCCTCCATTTGAGCAGGTGAGGGCAGCGCTTCCTGCTCTAGAACGATTGGTTTTTTCCAATGATGAAGAAGTCTTGACAGACGCATGTTGGGCACTATCATATCTTTCCGATGGAACAAATGACAAAATCCAAGCCGTTATTGAGGCTGGTGTGTGTCCCAGACTGGTGCAGCTCCTTCTGCACCCATCCCCTTCAGTGCTGATTCCTGCTCTTCGCACAGTGGGAAATATTGTGACAGGAGATGATATGCAGACTCAGACTATCATCAATCATGGTGCGCTCCCATGCCTCTTGAGCCTGTTGACACATAATCATAAAAAAAGTATCAAGAAAGAAGCTTGCTGGACCATTTCAAACATTACAGCTGGAAACAGAGATCAGATACAGGCTGTTGTTGAAGCTGGTTTGATTGCCCCCCTTGTCAATCTTCTTCAAAATGCTGAGTTTGACATTAAAAAAGAAGCTGCTTGGGCAATCTCAAATGCTACATCTGGTGGTACCCATGAGCAGATCAAGTATCTGGTGAGCCAGGGTTGCATTAAGCCTCTCTGTGATCTGCTTGTTTGCCCGGACCCAAGAATCGTCACTGTCTGTTTAGAAGGACTTGAGAATATTCTGAAGGTTGGGGAAGCTGAGAAGAGCATGGGTAACAGTGGAGATGTCAACTTGTATGCACAGATGATAGACGAAGCAGAGGGATTGGAGAAAATTGAAAACCTGCAGAGTCATGACAACAATGAAATATATGAAAAGGCTGTTAAAATTCTTGAGACATATTGGTTGGAAGACGATGATGAGACACTACCTACAGGCGATGGTGCTCAACCTGGTTTTAATTTTGGAAACAATGATGTTCCAGTTCCATCTGGTGGATTCAACTTTAGTTGA 1596 0.4837 MSLRPNARTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLQKKRREGLQAQQQFPTPLQAASIVEKKLESLPAMVAGVWSDDNSQQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSPKCRDLVLSHGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFEQVRAALPALERLVFSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVQLLLHPSPSVLIPALRTVGNIVTGDDMQTQTIINHGALPCLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVVEAGLIAPLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKSMGNSGDVNLYAQMIDEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEDDDETLPTGDGAQPGFNFGNNDVPVPSGGFNFS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00356 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 371 399 IPR000225 GO:0005515
Gma09g00356 531 Pfam Importin beta binding domain 12 96 IPR002652 GO:0006606|GO:0061608
Gma09g00356 531 PANTHER IMPORTIN ALPHA 2 522 - -
Gma09g00356 531 PIRSF Importin_alpha 2 530 IPR024931 GO:0005737|GO:0006606|GO:0061608
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 242 272 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Gma09g00356 531 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Gma09g00356 531 PANTHER IMPORTIN SUBUNIT ALPHA 2 522 - -
Gma09g00356 531 Gene3D - 74 497 IPR011989 -
Gma09g00356 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 328 371 IPR000225 GO:0005515
Gma09g00356 531 SUPERFAMILY ARM repeat 6 501 IPR016024 -
Gma09g00356 531 Gene3D - 11 50 IPR036975 GO:0006606
Gma09g00356 531 Pfam Atypical Arm repeat 458 503 IPR032413 -
Gma09g00356 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 317 358 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 191 232 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 360 400 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 275 315 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 149 189 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 234 273 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 403 443 IPR000225 GO:0005515
Gma09g00356 531 SMART arm_5 106 147 IPR000225 GO:0005515
Gma09g00356 531 MobiDBLite consensus disorder prediction 37 57 - -
Gma09g00356 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Gma09g00356 531 ProSiteProfiles IBB domain profile. 1 58 IPR002652 GO:0006606|GO:0061608
Gma09g00356 531 MobiDBLite consensus disorder prediction 506 531 - -
Gma09g00356 531 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00356 Gma-Chr9 3354140 3359146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00356 132 392 U-box Gene Family AT3G46510 25.670 3.76e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00356 K15042 - gmx:100780020 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00356 09 3354140 3359146 Gma09g00356 09 3354140 3359146 ECH
Gma09g00356 09 3354140 3359146 Gma19g02179 19 50627414 50633346 ECH
Gma09g00356 09 3354140 3359146 Gma03g02147 03 46928886 46934168 ECH
Gma09g00356 09 3354140 3359146 Gma10g01472 10 41818670 41824474 ECH
Gma09g00356 09 3354140 3359146 Gma20g02228 20 49397462 49401869 ECH
Gma15g01350 15 12053015 12056785 Gma09g00356 09 3354140 3359146 GST
Gma17g00286 17 2316821 2322843 Gma09g00356 09 3354140 3359146 PCT
Gma09g00356 09 3354140 3359146 Gma17g00286 17 2316821 2322843 PCT