Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00352 ATGAGTGCTTCAGAAAACCCTATTATTGATGAGACCACTGAGGGCAAAGCTTCTTCTTCTTCTTCCCCATCCTCATCAACAACGTTAAAACTATTCGGTTTCCTATTAACCCCAGCTGGTAACATTAATAACTATGAAGATATTAATCACATGCCAGCAACTAGCACCAATATTCCTTATAATACTACTTACAAGAGTCGATTCACATGTTACTTTTGCTACCGCGAATTCGCGAATTCTCAAGCTCTTGGTGGCCATCAAAATGCGCACAAGAAAGAGCGCAAAATAGCCGCGCTTTCATCCTTCGGATACTACCATCATCATCCACGGTTCATAGCACCTTCCCCATTAATCGTGGTTCCGCACGGAGGATCATCATCATCATCATCAGGACCGTTGGTTCGTCCACGTGGGGGGCCACGCCATAATCATCCTCCAATGGGTGCAAGCATGGGAGAACAACAGAATAATAATAATATTGTTGTTGATGATGCTGATGGTGATGTTGATCTTAACTTGAGTTTGGCTCACAGTACTACAACTTCCAAATTCAGGGGCAAGAAAATTCCCAAGAGGAGGAGAACTTGA 588 0.432 MSASENPIIDETTEGKASSSSSPSSSTTLKLFGFLLTPAGNINNYEDINHMPATSTNIPYNTTYKSRFTCYFCYREFANSQALGGHQNAHKKERKIAALSSFGYYHHHPRFIAPSPLIVVPHGGSSSSSSGPLVRPRGGPRHNHPPMGASMGEQQNNNNIVVDDADGDVDLNLSLAHSTTTSKFRGKKIPKRRRT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00352 195 MobiDBLite consensus disorder prediction 122 165 - -
Gma09g00352 195 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Gma09g00352 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Gma09g00352 195 MobiDBLite consensus disorder prediction 1 26 - -
Gma09g00352 195 PANTHER ZINC FINGER PROTEIN 8-LIKE 13 178 - -
Gma09g00352 195 PANTHER ZINC FINGER PROTEIN 5 13 178 IPR044299 GO:0010090
Gma09g00352 195 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00352 Gma-Chr9 3323400 3323987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00352 67 139 C2H2 Transcription Factor Family AT3G58070 42.353 4.65e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00352 - - gmx:102664415 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01346 15 12014136 12014693 Gma09g00352 09 3323400 3323987 GST