Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00350 ATGGGGAGATCTCCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGAAGATGGACTGCAGAAGAGGATAAAATCTTAACTGATTACATTCAAGAAAATGGTGAAGGCTCGTGGAAAATCTTGCCCAAGAATGCAGGTTTGTTGAGATGTGGGAAGAGTTGTCGACTGAGATGGATCAACTATTTGAGAGCTGACGTGAAGAGAGGTAACATCACTCCTGAGGAAGAAGAGATCATTGTCAAGTTGCATGCTGTTCTTGGTAATAGGTGGTCTGTGATAGCTGGACATTTACCAGGAAGAACAGACAATGAGATAAAGAACTATTGGAACTCTCACCTTAGGAGAAAGATCTATTGCTTCATGAGATCTCTAAATGAGTCTCTTCCACCCATTGACATGGCTGCTATAAACTCTGCCACATCCAAGAGAAGAGTTCGCGGTTCAAGAAACAAGCCAACCACAGAAGAGGAAAAGAACATTGCTTTGAGCCAAAACTCCTTTGAGTCAATGCCTAGTTGCAACAGAGAAGAAGGTGAAGAAATTTCCATGATGGATGCTTGTTATGAAATGGAGGGCATTACAGTTAGTAGCAAAGCTGCATCATACCCCAGTCTTGAAGACAGCTTGGGACCATATCATCATTGGTCTGATGATGAAATCATGAAACTTAGTAACATGTTTGAAAATGGGGTGCTTGTGAATCCATGTGGTAATGATTTAACCCTTAAGGAGGAGCCTAATGGAAATGAATGTGGCCAGATGAATGTGGATGTAATGGGAACAGATCAAAGCAAGAACAATGGTGTTTGGAACTCATCAAATGGAGAGAGTGGAGAATGGTACCCCAATTGTTCATCAGTGAATTCTGTCATTGATTATCAGTGGTCTGATTGGGACATGGGAGGAAGTGTTCAATCCAATAATCAGTGGAATCTTTGTGATGACCAAGTGATGAATTGCTTGTGGAGTACTGGCATTGGTGAAATAAATTATGGTTTTCATCCATAA 1005 0.4129 MGRSPCCEKVGLKKGRWTAEEDKILTDYIQENGEGSWKILPKNAGLLRCGKSCRLRWINYLRADVKRGNITPEEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMRSLNESLPPIDMAAINSATSKRRVRGSRNKPTTEEEKNIALSQNSFESMPSCNREEGEEISMMDACYEMEGITVSSKAASYPSLEDSLGPYHHWSDDEIMKLSNMFENGVLVNPCGNDLTLKEEPNGNECGQMNVDVMGTDQSKNNGVWNSSNGESGEWYPNCSSVNSVIDYQWSDWDMGGSVQSNNQWNLCDDQVMNCLWSTGIGEINYGFHP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00350 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma09g00350 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma09g00350 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma09g00350 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma09g00350 334 CDD SANT 16 61 IPR001005 -
Gma09g00350 334 MobiDBLite consensus disorder prediction 138 158 - -
Gma09g00350 334 Gene3D - 71 116 - -
Gma09g00350 334 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 296 - -
Gma09g00350 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma09g00350 334 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma09g00350 334 CDD SANT 71 112 IPR001005 -
Gma09g00350 334 PANTHER MYB TRANSCRIPTION FACTOR 2 296 - -
Gma09g00350 334 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma09g00350 334 SMART sant 13 63 IPR001005 -
Gma09g00350 334 SMART sant 66 114 IPR001005 -
Gma09g00350 334 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00350 Gma-Chr9 3304741 3309718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00350 1 313 MYB Transcription Factor Family AT5G49330 43.391 6.36e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma09g00350 Myb_DNA-binding 9.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00350 K09422 - gmx:100819041 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00350 09 3304741 3309718 Gma09g00350 09 3304741 3309718 ECH