Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00345 ATGATGATGTCACACAACTTAACGGGGCAGCTTGTGGGTGCAGAGATACATGGCTTTCACACGTTGGATGATTTGGATGTTAGTAATACTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGTAATCACAAATATTTCAAGATCAATGCCAAGCCAGTAAATTTGCCCAAAAGTGGTACTATTGTACTATTTGACCGCAAGATGCTTAGGAACTTCAGAAAAGATGGGCACAATTGGAAAAAGAAAACCGATGGAAAAACTGTTAAAGAAGCCCATGAACACTTAAAAGTTGGCAATGAAGAAAGGATCCACGTATATTATGCACATGGCCAGGATAAACCAACCTTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCATATAGTCCTTGTTCATTATCGTGACACACAAGAGTTACAATTGCAAGGTTCTCCTGCTACACCTGTAAATTCAAATTCAAGTTCTGTCTCTGATTCAGCTGCATCTTGGATTCCATCAGATGACTTGGATTCTGGGGTGAACAGTGCATATGCTGTTGAGCTTAATGACAGTTTAACTGCCAAAAGTCATGAGCAGAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTTCAAATGCCAACACTTCTACTACATCTAATGGAGGCAATGTTCCATATTCATTTCAACAAAATCAAAGTTTACTGAATGGAAGCTTTGGCAATGTATCCAGTGATCCTTCAGCAGAAATTCCTTCTTTTGGTAATTTAACTCAGCTAGTTTCTGGGAGCGATAGTGCTCCTTATAGTTTCCCAGAAAGTGCTGATCTTTTGAAAAGTAGTCCTTTATCTTCGGGTGGTGTTGACACCTTGGGCACTTTGGTCAACGAAGGCTTGCAAAGTCAGGACAGCTTTGGAACATGGATGAACATCATGTCGGATACACCATGTTCCATAGATGAATCAGCTCTTGAAGCAACAACTTCTTCTGTTCATGTACCATATTCATCACTGGTGGCAGATAATAAGCAATCTTCTCTGCCAGAACAAGTATTTAATCTCACTGAGGTGTCCCCTGTGTGGGCATCTTCCACCGAGAAAACAAAGGTCCTGGTAACTGGATATTTTCATAATAACTATCAACACCTTGCAAAGTCCAACCTACTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGGTGCTGGGTATCACCACACTCTCCTGGATTGGTCACTCTCTATTTGAGCTTTGATGGCCATAAGCCCATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTTTGCATGAGCCAACTGCTTTAATAGAAGAGAAATACAACTGGGATGAGTTTCGACTTCAGATGAGGCTTGCTCATTTGCTCTTTGCTTCAGACAAGAGCCTTAACATTTTCTCAAGTAAAGTATCAACTAATGCTCTGAAAGAGGCTAGAAGATTTTCCTTCAAAACATCATATATCTCTAAAAGTTGGCAACACTTGATGAAGTCAATTGATGACAAAACAATTCCATTTTCACAAGTAAAAGATGCCTTGTTTGAAACTTCATTGAAAAACAAATTAAAGGAATGGCTTTTGGAACGAATTATCTTAGGCAGCAAGAGTACTGAATATGATGCGCAAGGGCAAGCTGCAATTCATTTGTGTGCAATGCTGGGATATAATTGGGCAATTTCCTTATTTACATGGTCGGGCTTGTCGCTGGATTTCCGTGACAAATTTGGATGGACTGCTCTTCATTGGGCAGCATATTATGGAATAGAGAAAATGGTTGCAACTTTGTTATCTTGTGGGGCAAGGCCAAACTTGGTCACAGATCCAACTCCTCAATATCCAGGTGGATGTACTGCTGCTGATCTTGCTTATGTGAAGGGATGTGATGGCTTAGCTGCTTACCTTTCTGAGAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCTTGGCTGGAAATATCAGTGGCTCACTGGAAACTAGCTCAACTGATCCAGTAAATGCTGCGAACCTTACCGAGGACCAACTTTACCTAAAGGAGACTTTGGAAGCTTACCGTACAGCTGCCGAGGCAGCAGCACGTATTCAAGCTGCATTTAGGGAGCATTCATTTAAATTACGATATCAAGCAGTTGAAATTATGAGCCCAGAGGAAGAAGCACGTCAGATAGTAGCAGCAATGAGGATTCAACATGCCTTTCGCAACTATGAGTCAAAGAAAAAGATGGCAGCCGCTGCTCGGATTCAGCTTAGATTCCGTACATGGAAGTACCGTAGAGAATTTCTCAATATGCGGCGTCAGGCTATTAAAATTCAAGCTGCTTTCAGGGGCTTTCAAGCACGGAAGCAATATCGGAAAATCGTATGGTCTGTTGGGGTGCTTGAGAAAGTGATCCTGCGTTGGCTTTTAAAGAGAAAAGGCTTCCGTGGTCTCCAGGTTAATCCTGCCGAGGAGGAGACACAGGAAAGTGATACAATTGCAGAGGAGGATTTCTTTCGCACCAGCCGGAAACAAGCCGAAGAACGTGTTGAGAGGTCTGTCATACGTGTGCAGGCCATGTTCCGTTCTAAGAAAGCACAAGAAGAATATAGAAGGATGAAGCTGACACATAATCAAGCAATGCTGGATGAATTAGAAGAATTCCTAAATTCTGAAGATGACATGTTACCCAAGACATAG 2736 0.4181 MMMSHNLTGQLVGAEIHGFHTLDDLDVSNTMEEAKSRWLRPNEIHAILCNHKYFKINAKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKTDGKTVKEAHEHLKVGNEERIHVYYAHGQDKPTFVRRCYWLLDKSLEHIVLVHYRDTQELQLQGSPATPVNSNSSSVSDSAASWIPSDDLDSGVNSAYAVELNDSLTAKSHEQRLHEINTLEWDDLVVSNANTSTTSNGGNVPYSFQQNQSLLNGSFGNVSSDPSAEIPSFGNLTQLVSGSDSAPYSFPESADLLKSSPLSSGGVDTLGTLVNEGLQSQDSFGTWMNIMSDTPCSIDESALEATTSSVHVPYSSLVADNKQSSLPEQVFNLTEVSPVWASSTEKTKVLVTGYFHNNYQHLAKSNLLCVCGDVSVPVEIVQVGVYRCWVSPHSPGLVTLYLSFDGHKPISQVVNFEYRTPILHEPTALIEEKYNWDEFRLQMRLAHLLFASDKSLNIFSSKVSTNALKEARRFSFKTSYISKSWQHLMKSIDDKTIPFSQVKDALFETSLKNKLKEWLLERIILGSKSTEYDAQGQAAIHLCAMLGYNWAISLFTWSGLSLDFRDKFGWTALHWAAYYGIEKMVATLLSCGARPNLVTDPTPQYPGGCTAADLAYVKGCDGLAAYLSEKSLVEQFNDMSLAGNISGSLETSSTDPVNAANLTEDQLYLKETLEAYRTAAEAAARIQAAFREHSFKLRYQAVEIMSPEEEARQIVAAMRIQHAFRNYESKKKMAAAARIQLRFRTWKYRREFLNMRRQAIKIQAAFRGFQARKQYRKIVWSVGVLEKVILRWLLKRKGFRGLQVNPAEEETQESDTIAEEDFFRTSRKQAEERVERSVIRVQAMFRSKKAQEEYRRMKLTHNQAMLDELEEFLNSEDDMLPKT 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00345 911 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Gma09g00345 911 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Gma09g00345 911 Gene3D - 527 665 IPR036770 -
Gma09g00345 911 ProSiteProfiles IQ motif profile. 863 891 IPR000048 GO:0005515
Gma09g00345 911 SMART ANK_2a 596 625 IPR002110 GO:0005515
Gma09g00345 911 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Gma09g00345 911 Gene3D - 757 807 - -
Gma09g00345 911 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Gma09g00345 911 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 908 - -
Gma09g00345 911 Pfam Ankyrin repeats (3 copies) 548 625 IPR002110 GO:0005515
Gma09g00345 911 SMART iq_5 706 728 IPR000048 GO:0005515
Gma09g00345 911 SMART iq_5 782 804 IPR000048 GO:0005515
Gma09g00345 911 SMART iq_5 861 883 IPR000048 GO:0005515
Gma09g00345 911 SMART iq_5 759 781 IPR000048 GO:0005515
Gma09g00345 911 ProSiteProfiles Ankyrin repeat region circular profile. 596 624 - -
Gma09g00345 911 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 908 - -
Gma09g00345 911 SUPERFAMILY Ankyrin repeat 554 658 IPR036770 -
Gma09g00345 911 Gene3D Immunoglobulins 355 450 IPR013783 -
Gma09g00345 911 ProSiteProfiles IQ motif profile. 707 736 IPR000048 GO:0005515
Gma09g00345 911 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Gma09g00345 911 SMART CG_1_2 31 148 IPR005559 GO:0003677
Gma09g00345 911 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Gma09g00345 911 SUPERFAMILY E set domains 360 447 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00345 Gma-Chr9 3238890 3249640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00345 31 895 CAMTA Transcription Factor Family AT3G16940 55.161 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gma09g00345 CG-1 1.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00345 K21596 - gmx:100776839 1780.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00345 09 3238890 3249640 Gma09g00345 09 3238890 3249640 ECH
Gma15g01339 15 11902904 11913123 Gma09g00345 09 3238890 3249640 GST
Gma17g00294 17 2379404 2386529 Gma09g00345 09 3238890 3249640 PCT
Gma09g00345 09 3238890 3249640 Gma17g00294 17 2379404 2386529 PCT