Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00328 ATGGAAGATTTGTACCATGTCAGTTTCACTACAGATGACAATTCTAGTTCATCCAACGACATTTTGTGGTGTACTGAGGAACTGAATGAATTGAGAAAGGTCCAATTTTCGGGAGCAGAAGATCATGGAGAGTATGGGGGAATTGACCCACTTTACTCTAATTTTGGGTTCTTCCCAGATGATCCATCAGAACAAGAAGGGTACCTTCTATCCACTGATCAACAAAAGTATCACCAGCAAGTGCAACCATCATACCATGATTATGGACAATTGGATGATAACCTTCAGTTTGACATGGTATCTCCACCACTCCAATTTGATGCACAATATCCAACCATGGTTCCACTATGTCACACAACAAAGGACAAGCCAAACTCAAACTCAAATACCCCTTTAGCCTCACTTGACATCTTGAACAACTATGGCAAGGGCTTCAAGAGGTTACGCAATGAAGACAAAACCCTGAAGCAAGTTGATGATGTGGCTATGGCCACAACAAATGAGGGTATTATGAGAAAGCTCTCAACAGAAGATGTCATGAGGATAGCTGGGACAAGGTTCATCCAATCATCATCATCAGAGTCGGAATCTTTGCCTTTCTTGGAAACTCACCCTTTTGGTATTTACTTCTCTGGACTCTCTAATGAGGAGAAAGAGGATGTGGAACTTGCTGAGTCCCTCTTGGCTTGTGCCGAGAAAGTTGGCCACCAACAGTTTGAACGTGCAAGCAAATTGCTGAGTCGTTGCGAATCATTATCTTGCAAAACGGGGAGTCCAGTTAGGCGTATTGTTCATTACTTTGCAGAGGCACTTCGCCAGAGGATAGATAGAGCAACAGGAAGAGTTTCATACAAGGATTTGCAAAAGGGTCCTTCATTTGATCCTTTAGAGGCAACCAAGGTACTAAACCCCACTGTTGTTGCATTTTATGAAGAGCTTCCCTTTTGTCAAATTTCTGTGTTCACAGAAGTTCAAGTTATAATAGAAGATGTTGCTGAAGCAAAGAAGATTCATGTTATTGATCTTGAGATCAGAAAGGGGGTGCAGTGGACTATCCTAATGCAAGCCCTTGAGTCAAGACATGAATGTCCAATTGAGCTTCTTAAGATAACCGCTGTAGAAAGTGGAACCACTAGACACATAGCTGAGGACACTGGTGAGAGACTAAAGGATTATGCTCAAGGTTTGAACATACCCTTCTCTTACAACATTGTTATGGTATCGGATATGTTACATCTAGGAGAAGATGTTTTTGAGATTGATCCTGAGGAAACAATTGTTGTTTATTCTCATTTTGCACTTAGAACCAAGATTCAAGAATCTGGCCAGCTTGAAATCATGATGAGAGTGATTAGAATCTTGAATCCTAGTGTGATGGTGGTAGCTGAAATTGAGGCAAACCACAATTCTACATCTTTTGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTTAGCACATTCTTTGATTGCCTTGAGACTTGTATGAAAGGGGATGAGGGGAATCGAATGATTGTAGAATCCCTATACTTCAGTCATGGAATAAGGAATATTGTGGCTGCAGAAGGAGCAGAAAGAGATAGTAGGAGTGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAATTGAGCAAATTGTGTTTATTTCAAGCGGATTTGGTGGCTAAAAGATTTCCTTCTTATAGCACGTTTGATAAGAATGGGCATTGCCTTCTTATTGGGTGGAAAGGAACACCAATCAACTCTGTTTCTGTCTGGAAATTTCTTTGA 1788 0.4111 MEDLYHVSFTTDDNSSSSNDILWCTEELNELRKVQFSGAEDHGEYGGIDPLYSNFGFFPDDPSEQEGYLLSTDQQKYHQQVQPSYHDYGQLDDNLQFDMVSPPLQFDAQYPTMVPLCHTTKDKPNSNSNTPLASLDILNNYGKGFKRLRNEDKTLKQVDDVAMATTNEGIMRKLSTEDVMRIAGTRFIQSSSSESESLPFLETHPFGIYFSGLSNEEKEDVELAESLLACAEKVGHQQFERASKLLSRCESLSCKTGSPVRRIVHYFAEALRQRIDRATGRVSYKDLQKGPSFDPLEATKVLNPTVVAFYEELPFCQISVFTEVQVIIEDVAEAKKIHVIDLEIRKGVQWTILMQALESRHECPIELLKITAVESGTTRHIAEDTGERLKDYAQGLNIPFSYNIVMVSDMLHLGEDVFEIDPEETIVVYSHFALRTKIQESGQLEIMMRVIRILNPSVMVVAEIEANHNSTSFVNRFIEALFFFSTFFDCLETCMKGDEGNRMIVESLYFSHGIRNIVAAEGAERDSRSVKIDVWRAFFSRFGMVEKELSKLCLFQADLVAKRFPSYSTFDKNGHCLLIGWKGTPINSVSVWKFL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00328 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 593 IPR005202 -
Gma09g00328 595 Pfam GRAS domain family 224 593 IPR005202 -
Gma09g00328 595 ProSiteProfiles GRAS family profile. 214 593 IPR005202 -
Gma09g00328 595 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 37 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00328 Gma-Chr9 3071630 3073658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00328 213 594 GRAS Transcription Factor Family AT3G03450 31.266 2.65e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma09g00328 GRAS 2.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00328 - - gmx:100818523 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00328 09 3071630 3073658 Gma09g00328 09 3071630 3073658 ECH
Gma15g01318 15 11701334 11705889 Gma09g00328 09 3071630 3073658 GST