Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00325 ATGTCGTTCTCGAGCGCCTTCGCGGACATCCTCAAGGGAACCCTCCGCGGCCACACCATCACCATGCCGGATCACGATCCGAAGGCCAGCCACCACCGCTCTGTGAAAGATATCTGCTCCCACACGGACTACCCGGAGGTGTGCGTGTCCACCATCACGCCGTTCGTCGGCAACGACTTAGACCTCATGAACGTCCTCGAGGCCGCCATCAAGGCCTGCTCCTTCCAGGCCAACTTCACCATCTCCGTCGTCGCCAAGCACATGAAGGCCTCGCCGGAGATGGCCGCCGCGCTCGAGGACTGCAAGGAGCAGTACACCAGCGCCCTGGAGAACCTCCACAGAGCCATGGAGGCTATTCCGTCCCGCGATCTCGGCACCGTTACGGTTATGCTCAGCGCTGTTTTGGCGGATGTTTCTGCGTGCGAGAGTGGGTTTGAGGAGCAAAAGACTGCATTGTCCATGCCTCATTCGGAAGGCATGGTTAGCATTACTGCCAGTATTTGTCTTTCCATTGCTTCGTTGATTCCCTATTAG 534 0.5824 MSFSSAFADILKGTLRGHTITMPDHDPKASHHRSVKDICSHTDYPEVCVSTITPFVGNDLDLMNVLEAAIKACSFQANFTISVVAKHMKASPEMAAALEDCKEQYTSALENLHRAMEAIPSRDLGTVTVMLSAVLADVSACESGFEEQKTALSMPHSEGMVSITASICLSIASLIPY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00325 177 SMART PMEI_2 30 171 IPR006501 GO:0004857
Gma09g00325 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 175 - -
Gma09g00325 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 175 IPR035513 -
Gma09g00325 177 Coils Coil 98 118 - -
Gma09g00325 177 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 172 IPR006501 GO:0004857
Gma09g00325 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 176 IPR035513 -
Gma09g00325 177 Pfam Plant invertase/pectin methylesterase inhibitor 34 170 IPR006501 GO:0004857
Gma09g00325 177 CDD PMEI-like_2 34 175 - -
Gma09g00325 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00325 Gma-Chr9 3059772 3060305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00325 30 145 Carbohydrate Esterase AT3G14310 27.907 4.49e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00325 - - gmx:102664156 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01316 15 11687299 11688006 Gma09g00325 09 3059772 3060305 GST