Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00324 ATGGCGTTTTGGTGGCCATTGCTCGTTCTGGCACTCGCTTTCGCCATCTGCAAGTTCCTTCTCATTCTCATTCCTCCCAAGGTTCCTTCCATCGACGTCGACGCTTCGGATGTGTTGGACGATGGCAGCCAGGCGCAGGAGAACAGCTTCATATACGTGCCTCCAAGGGGAACGGCGCAGCAATCGAGCGGGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATATGTTCCTGCATTGACGCCGGATGAGGCCAGGGAGCAAGTGGAAAAAGTACGGAAGGCACAAAAAATGTGGGCGAAGACAAGCTTCAAGAAAAGGCGCCAGTTTTTACGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGCGATACTGGAAAGACAATGGTGGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTACTGTCGGAGGGTGAGCAGTGCCTAAAGCCTGAGTACCGATCCTCTGGAAGAGCTATGCTTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTTGGTGTTATCGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAATATTTTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCGTTGTGATTAAGATTTCGGAACATGCTAGTTGGTCTGGATGCTTTTACTTCAGAATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCGGAGGACCTTGTTGAGGTGATAACAGGGTATAGCCTTATTTTGTGCCCTTCTTCCCCTGGTTTCCGTCACATCTGCATCTATAGCCTTAATTGGACTTTTCTTACCAGGTTTGCTGAAACAGGAGAAGCACTGGTATCTTCTGCTGACAAAGTCATTTTTGTTGGATCCCCTGGGGTTGGCAAGATGATAATGAGCAATGCTGCCGAGACACTTATCCCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGATCTTGTTGCTCAAATTGCTGTCAGGGCTGCTCTTCAGTCAAGTGGGCAGAACTGTGCTGGGGCTGAGAGGTTTTATGTCCACAGGAAAATTTATGCATCCTTTGTCAGTAAAGTTACCAAAATTATAAAATCCATTACAGCTGGCCCACCTCTTGCTGGAAAGTATGATATGGGAGCTTTATGTATGCATGCACATTCTGAAATGCTTGAAGCCCTTATAAATGATGCTTTAGACAAAGGAGCTGAAATTATTGCACGTGGAAGTTTTGGACCTATAGGTGAAGATGCAGTTGATCAATATTTTCCCCCTACAGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTGTCAGGCTTGCAAATGACTCAAAATATGGGCTTGGGTGTAACGTTTTCTCAGGCAGTCAGAGCCGTGCTAGAGAGATAGCTTCCCAGATACATTGTGGGCTTGCTGCAGTTAATGATTTTGCATCAACATACATGTGTCAGTCCCTTCCATTTGGGGGCGTGAAAAACAGTGGATTTGGACGATTCGGTGGTGTTGAGGGTTTGCGAGCCTGCTGCCTTGTAAAATCTGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCGTGATACCGAAGCCTATTCAGTATCCTGTAGCTGAAAATGGATTTGAGTTCCAGGAGTCGCTTGTTGAAGCACTATACGGGCTCAGCGTGTGGGACCGTTTGCAAGCATTGGTTAACGTGCTGAAAATGCTTACTGAGCAGAACTCTACAAGTGGCAGCAGAAAAAAGAAAAATGACTAA 1875 0.4469 MAFWWPLLVLALAFAICKFLLILIPPKVPSIDVDASDVLDDGSQAQENSFIYVPPRGTAQQSSGKVQCYEPATMKYLGYVPALTPDEAREQVEKVRKAQKMWAKTSFKKRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGYSLILCPSSPGFRHICIYSLNWTFLTRFAETGEALVSSADKVIFVGSPGVGKMIMSNAAETLIPVTLELGGKDAFIVCEDVDVDLVAQIAVRAALQSSGQNCAGAERFYVHRKIYASFVSKVTKIIKSITAGPPLAGKYDMGALCMHAHSEMLEALINDALDKGAEIIARGSFGPIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCNVFSGSQSRAREIASQIHCGLAAVNDFASTYMCQSLPFGGVKNSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTVIPKPIQYPVAENGFEFQESLVEALYGLSVWDRLQALVNVLKMLTEQNSTSGSRKKKND 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00324 624 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 324 331 IPR029510 GO:0016491
Gma09g00324 624 Pfam Aldehyde dehydrogenase family 62 258 IPR015590 GO:0016491
Gma09g00324 624 Pfam Aldehyde dehydrogenase family 286 554 IPR015590 GO:0016491
Gma09g00324 624 CDD ALDH_F15-22 69 558 - -
Gma09g00324 624 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 328 520 IPR016163 GO:0016620
Gma09g00324 624 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 259 - -
Gma09g00324 624 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 281 589 - -
Gma09g00324 624 SUPERFAMILY ALDH-like 57 556 IPR016161 GO:0016491
Gma09g00324 624 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 352 363 IPR016160 GO:0016491
Gma09g00324 624 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 282 551 IPR016162 GO:0016491
Gma09g00324 624 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 46 273 IPR016162 GO:0016491
Gma09g00324 624 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 259 - -
Gma09g00324 624 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 281 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00324 Gma-Chr9 3042626 3052727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00324 1 623 Aldehyde Dehydrogenase Gene Family AT3G66658 74.639 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00324 - - gmx:100816920 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00324 09 3042626 3052727 Gma09g00324 09 3042626 3052727 ECH