Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00312 atgttccatgcattgatgagccttatcgcgcgctgttggaagccgttcgggcacggtgacgacgccgctaatgccgccgccgccgccggaagagaatgcaaggacggcctcctctggttccgcgacatcggaaagttcgccgccggcgatttctccatggccgtcgtccaggccaaccaggtcctcgaggaccaGAGCCAGATCGAGTCCGGCGCCTTCGGCTCCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTATGTCTGCGACAACTTGTTCCGCAATCTCCAAGCGATATTGGCTGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAGGCGTTCCGGCGGACTGAGGAGGGGTTCACGGCGCTTGTTTCGGAGCTGTGGAGCTCCCGGCCGCAGATTGCGACTACTGGGACGTGTTGTTTGGTTGGGGTTATTTGCCGGCAGACGCTCTTTGTGGCGAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTCGGCAACACCGGTGGGATGGCCGCGATTCAGTTGTCTACGGAGCACAATGCGAATTTTGAGGCTATCAGGCAGGAGCTTAAGGAATTGCACCCGAATGACCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAGGGAATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGCGAACCCATTAATGCAAAATTCAGACTCCCCGAACCAATGGACATGCCTTTCTTGTCTGCTAATCCAACTATTCTTTCTCATACTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCACGCGCGGGTAGTGCCAAGAGACTTGTCAAGGCTGCCCTACACGAAGCAGCAAGAAAGCGTGAAATGCGATATTCAGACCTTTACAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGTTCTAAATACGCCACTCACAATTCGAAGTGCTCTCGATCACTGA 1125 0.4133 MFHALMSLIARCWKPFGHGDDAANAAAAAGRECKDGLLWFRDIGKFAAGDFSMAVVQANQVLEDQSQIESGAFGSFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANFEAIRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMDMPFLSANPTILSHTLQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPRAGSAKRLVKAALHEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLISRGAVLNTPLTIRSALDH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00312 374 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Gma09g00312 374 ProSiteProfiles PPM-type phosphatase domain profile. 50 351 IPR001932 -
Gma09g00312 374 SUPERFAMILY PP2C-like 60 352 IPR036457 -
Gma09g00312 374 CDD PP2Cc 51 351 IPR001932 -
Gma09g00312 374 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Gma09g00312 374 Gene3D - 44 359 IPR036457 -
Gma09g00312 374 SMART PP2C_4 44 349 IPR001932 -
Gma09g00312 374 Pfam Protein phosphatase 2C 75 321 IPR001932 -
Gma09g00312 374 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00312 Gma-Chr9 2948916 2954509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00312 1 371 PP2C-type Phosphatase Gene Family AT4G38520 58.947 1.64e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00312 K01102 - gmx:100814799 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00312 09 2948916 2954509 Gma09g00312 09 2948916 2954509 ECH
Gma15g01299 15 11513334 11519374 Gma09g00312 09 2948916 2954509 GST
Gma17g00321 17 2561382 2566749 Gma09g00312 09 2948916 2954509 PCT
Gma09g00312 09 2948916 2954509 Gma17g00321 17 2561382 2566749 PCT