Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00309 ATGTCGTCATCTCTGATCGCGAATCCAACCGCGGATCGCTCGCGTGACTCTCACCGCACAAAGAAGAAGAAGAAATCTATTAAGCAACACCAACAGCAGCATGACGCGAAATGGAAAACCCACGCGCAGCAGCAGCTATACTCCTCCAAGCTCCACCAGGCCCTCGCGCGTGTCAACATCTCCGGCGACGCGCCACGCCGCGGCAGGGCGGTGCGCGATGCCGCCGACAGGGTGCTCGCCGTGGCCGCCAAGGGGAGGACGCGGTGGAGCCGCGCCATCTTAACGAACCGGCTGAAGGTCAAGTTCAGGAAGCCGGTTCACAAGAGGCAGAAGGTTGTTGTTGTTGGGCCGGGCCGGCCAAAGAAAAAGGCCCGGTTCAGCGTTCTCCGGCTCAGGGGGAAAACCTTACCCGCGGTTCAGAGGAAAGTTAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGGTGATTCTCGAAGAGGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGCAAGCTCTCGCTGACTTACTCTTAGGCTCTTCCTCCGCCTCCACCTCCGCCACCGCCGCGCCGCCTAGTTGA 609 0.6059 MSSSLIANPTADRSRDSHRTKKKKKSIKQHQQQHDAKWKTHAQQQLYSSKLHQALARVNISGDAPRRGRAVRDAADRVLAVAAKGRTRWSRAILTNRLKVKFRKPVHKRQKVVVVGPGRPKKKARFSVLRLRGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSATAAPPS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00309 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 189 IPR036638 GO:0046983
Gma09g00309 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 198 IPR044660 GO:0006355
Gma09g00309 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 11 198 - -
Gma09g00309 202 MobiDBLite consensus disorder prediction 1 39 - -
Gma09g00309 202 CDD bHLH_AtIBH1_like 128 183 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00309 Gma-Chr9 2926308 2928086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00309 36 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.366 3.94e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00309 - - gmx:100786088 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00309 09 2926308 2928086 Gma09g00309 09 2926308 2928086 ECH
Gma15g01296 15 11486036 11487263 Gma09g00309 09 2926308 2928086 GST
Gma17g00328 17 2607636 2608660 Gma09g00309 09 2926308 2928086 PCT
Gma09g00309 09 2926308 2928086 Gma17g00328 17 2607636 2608660 PCT