Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g00292 | ATGGAAGTGAAAGGAATAAGGGCAAGCAACTCCACCACCACCACCACCACAATCCAAAGTGAGGATGAGAtggaccttcgaagaggtccttggaccgtcgatgaggaccttgCTCTCATCAATTACATTGCCAATCACGGTGAAGGTCGATGGAACTCTCTTGCTCGTTCAGCTGGACTCAAACGAACTGGCAAGAGCTGCAGATTGAGATGGTTGAATTATTTGCGTCCTGATGTTCGACGTGGAAACATCACACTTGAAGAACAGCTTCTTATTCTTGAACTCCACGGTCGCTGGGGAAACCGTTGGTCTAAAATTGCTCAATATTTGCCGGGAAGAACCGATAATGAGATTAAAAACTATTGGAGAACCCGTGTCCAAAAGCATGCCAAGCAACTCAAATGTGACGTGAATAGCAAGCAATTCAAGGATGCCATGCGCTATCTTTGGATGCCGAGGCTGGTGGAGCGCATTCAAGCCGCCGCCGCTGCCACCACCACCGTGGCGGCTGCGGGTTCTCCAACGGCATCTGCCAGTGCTACCACAACCATCACCACCAACAACAACACCACCACATACAACTACTACGACAACAACAACCTTAACAACAGTTTTGAGGTGCACAGTGGGAACATGATGGTGAGAAATCCAACAATCATGAACAACAATAACTTTTGTGGTTCACATAGTTACACTCCCGAGAATAGTAGCACGGGTGCATCATCGGATTCGTTTGGTACACAGGTTTCACCTGTCTCGGACTTGACTCAGGATTATTACAATAATGTCACGGCTGGGAATAATAACAACAATAACCCTAATCCTGATCAGTATTACCAACAAGCACATGATCAACTGAGTTTCTTAGACTGCATCACAAGCCCATCAGGGTTGTTCGATTTCCAACCCATGGAACCAAACACCCCGTGGATTAATCTGAGTAATGTTGGGGACACGTCCAACGGTTTCTGGAATGTTGAAAACATGTTGCTCTTTCAACAATTCTCTGACAACAACATGTGA | 1023 | 0.4418 | MEVKGIRASNSTTTTTTIQSEDEMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHGRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAATTTVAAAGSPTASASATTTITTNNNTTTYNYYDNNNLNNSFEVHSGNMMVRNPTIMNNNNFCGSHSYTPENSSTGASSDSFGTQVSPVSDLTQDYYNNVTAGNNNNNNPNPDQYYQQAHDQLSFLDCITSPSGLFDFQPMEPNTPWINLSNVGDTSNGFWNVENMLLFQQFSDNNM | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g00292 | 340 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 336 | - | - | |
Gma09g00292 | 340 | ProSiteProfiles | Myb-like domain profile. | 76 | 126 | IPR001005 | - | |
Gma09g00292 | 340 | SMART | sant | 80 | 128 | IPR001005 | - | |
Gma09g00292 | 340 | SMART | sant | 27 | 77 | IPR001005 | - | |
Gma09g00292 | 340 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Gma09g00292 | 340 | CDD | SANT | 96 | 124 | IPR001005 | - | |
Gma09g00292 | 340 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 23 | 79 | IPR017930 | - | |
Gma09g00292 | 340 | Gene3D | - | 25 | 81 | - | - | |
Gma09g00292 | 340 | ProSiteProfiles | Myb-like domain profile. | 23 | 75 | IPR001005 | - | |
Gma09g00292 | 340 | Gene3D | - | 85 | 148 | - | - | |
Gma09g00292 | 340 | SUPERFAMILY | Homeodomain-like | 25 | 122 | IPR009057 | - | |
Gma09g00292 | 340 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 1 | 336 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Gma09g00292 | 340 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 80 | 130 | IPR017930 | - | |
Gma09g00292 | 340 | CDD | SANT | 30 | 75 | IPR001005 | - | |
Gma09g00292 | 340 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Gma09g00292 | 340 | Pfam | Myb-like DNA-binding domain | 81 | 124 | IPR001005 | - | |
Gma09g00292 | 340 | Pfam | Myb-like DNA-binding domain | 28 | 75 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g00292 | Gma-Chr9 | 2724212 | 2726654 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g00292 | 21 | 326 | MYB Transcription Factor Family | AT3G06490 | 53.251 | 1.04e-88 | 267 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gma09g00292 | Myb_DNA-binding | 4.8e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g00292 | K09422 | - | gmx:100805341 | 592.808 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma09g00292 | 09 | 2724212 | 2726654 | Gma09g00292 | 09 | 2724212 | 2726654 | ECH | |
Gma15g01276 | 15 | 11249004 | 11250870 | Gma09g00292 | 09 | 2724212 | 2726654 | GST |