Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00281 ATGGAAGCAGCTGAGCCTGCCACCGCTCCTCAGTTGGCCCTCGCCGACACAGACATCAACTGGGACAGGTTGGATAAAACAAAGTTCCACATGATTGGCGCCATTCTCTTCACCGTTCAATCAGCGCTGCTCCATCCAACGGCGGTGGTGAAGACGCGCATGCAAGTGGCGGCGGGGTCGCGAGGAATGTCGGTGTTCAGTCACATTCTCCGGAGCGATGGCATTCCGGGTATCTTCAGAGGCTTCGGCACTTCCGCCGTCGGTTCGGTGCCCGGTAGGATCCTCGCTCTCACCTCTCTCGAGGTCTCCAAAGACATCATCTTGAAACACACGCAAGGCACTCACATTCCAGAAGCTTCACGCGTCGGCCTCGCCAACGGGGTCGCCGGCTTGGTCTCCAACTTGGTTTCTTGTGTCTATTTTGTGCCCTTGGACGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCAGGGACAACGTTTTGTAGAGGGCCACTTGATGTTGTTCGTAAAGTTGTGGAGGCTGAGGGGTTTCGAGGCTTGTATAGGGGTTTTGGATTAACAGCTCTAACCCAGTCACCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCAGCACAACACCTCATTTGGAGGAGTTTGGGCTACAAAGATGATACAGGGAACAAACCTTCACATATGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTGGCTGGTGCTTGTTCCTCTGTTATCACTACTCCCATAGATACTGTAAAAACACGTCTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTACTGAAGACAGCAAAGACTCTCCTTAAGGAAGATGGTTGGTGGGGATTTTACAGGGGGTTTGGACCAAGATTCTTAAACATGTCACTTTATGGAACAACCATGATTGTTACTTATGAACTGATAAAGAGATTATCAGTTCAATCAAGTCTGAAAAAGAGTGTGTTGTTTTTTTCTTTTCCTGAATCTACATCTCGGTGGACTTCTCTCTCTTCTCGTTCTAATCATATAATGGGGTTGTCCTTTGGCAAGCTTTTCTCAAAACTCTGCGCTAAGAAAGAGATGCGAATTCTCATGGTTGGTCTTGATGCTGCTGGTAAAACCACAATATTGTATAAACTCAAGTTAGGGGAGATTGTCACCACCATTCCTACTATTGGATTTAACGTGGAGACTGTGGAGTATAAGAACATTAGCTTCACTGTGTGGGATGTTGGTGGTCAGGATAAGATTCGACCATTGTGGAGACACTATTTCCAAAACACACAAGGGCTTATTTTTGTGGTTGACAGCAATGATCGCGACCGTGTTGGCGAGGCTAAAGACGAGTTACACAGGATGCTGAATGAGGACGAACTAAGAGATGCTGTGTTGCTTGTTTTTGCAAACAAGCAAGATCTTCCCAATGCAATGAATGCTGCTGAAATAACTGATAGACTTGGCCTAAACTCTCTGCGCCAGCGCCACTGGTATATTCAAAGTACGTGTGCTACTTCTGGTGAAGGTCTATACGAGGGACTAGACTGGCTTTCAAATAACATTTCAGGCAAGGCTTCCTTCAAATGA 1596 0.4731 MEAAEPATAPQLALADTDINWDRLDKTKFHMIGAILFTVQSALLHPTAVVKTRMQVAAGSRGMSVFSHILRSDGIPGIFRGFGTSAVGSVPGRILALTSLEVSKDIILKHTQGTHIPEASRVGLANGVAGLVSNLVSCVYFVPLDVICQRLMVQGLPGTTFCRGPLDVVRKVVEAEGFRGLYRGFGLTALTQSPASALWWGSYAAAQHLIWRSLGYKDDTGNKPSHMEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTAKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQSSLKKSVLFFSFPESTSRWTSLSSRSNHIMGLSFGKLFSKLCAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEAKDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDRLGLNSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISGKASFK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00281 531 Pfam Mitochondrial carrier protein 31 110 IPR018108 -
Gma09g00281 531 Pfam Mitochondrial carrier protein 232 317 IPR018108 -
Gma09g00281 531 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Gma09g00281 531 ProSiteProfiles small GTPase Arf family profile. 358 524 - -
Gma09g00281 531 SUPERFAMILY Mitochondrial carrier 22 311 IPR023395 -
Gma09g00281 531 PANTHER OS01G0329400 PROTEIN 4 318 - -
Gma09g00281 531 SMART rab_sub_5 365 498 - -
Gma09g00281 531 Gene3D Mitochondrial carrier domain 22 160 IPR023395 -
Gma09g00281 531 SMART sar_sub_1 348 524 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 106 IPR018108 -
Gma09g00281 531 Pfam ADP-ribosylation factor family 354 524 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 TIGRFAM small_GTP: small GTP-binding protein domain 363 490 IPR005225 GO:0005525
Gma09g00281 531 SMART arf_sub_2 348 528 - -
Gma09g00281 531 Gene3D Mitochondrial carrier domain 162 357 IPR023395 -
Gma09g00281 531 PRINTS GTP-binding SAR1 protein signature 421 446 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 PRINTS GTP-binding SAR1 protein signature 394 418 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 PRINTS GTP-binding SAR1 protein signature 366 389 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 PRINTS GTP-binding SAR1 protein signature 466 487 IPR006689 GO:0003924|GO:0005525
Gma09g00281 531 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 209 IPR018108 -
Gma09g00281 531 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 318 - -
Gma09g00281 531 Gene3D - 358 530 IPR027417 -
Gma09g00281 531 CDD Arf1_5_like 365 523 IPR045872 GO:0003924
Gma09g00281 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 524 IPR027417 -
Gma09g00281 531 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 315 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00281 Gma-Chr9 2590105 2597021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00281 16 315 Chloroplast and Mitochondria Gene Families AT5G15640 50.327 6.43e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00281 K15121 - gmx:112997745 632.484