Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00263 ATGGCCCATCCAGCTGTTAATGGTGGTGGTGATAACGGCATTCCGATGATTTTAACTGATCCAGATGTATTTGTTTGTTGTGGGTGTCGTGATACATTAACCATTCCAATCTACGAGTGCACCAAAGGGCACGTAATTCTTTGTTCTCCCTGCTGTAACAAGCATGGGTACAAGTGTCCCTTTTGCTCAATGTTCATCGGGGACAAGCGTTGCCGAGCTATTGAGGCAGTGATGGAATCAATGAAAACCGTGTGCTGTTATGCAAAACATGGTTGTAATGCAATTGTGAGGTACAGTGAGAAACGTGATCATGAGAAGACATGCACCTTTGTACCATGTTTATGTCCCCAGCCACGTTGTGATTGGATTTCCAATTCCAACGAATTAGGGCAACATTTCAAAGTGAAGCATTTCTACAAGAGAATACCATTTAAATATGGAGAGTTTTTTTATGTGTCTTTGAGGCGGGACACGACGACTCGTGTTCTTCAAGCGGTAAGTGATGGAAAATTGTTTGTGATCAGCAATGATAAGAGGGAGAAGAAAAATTCATTGATTCTTTTCCATGTTGGGCCTAACTCGTGGATCCCTAAGTTTGATTATGAAGTTAGGGCAACGTCTGATGGTGCAGTTCTATTGCCTCAAACTTTTGTGGAGACAACTCAAGGACTGAAGTTTGAGTTTTCTTTACTAAGCTTTTTACACATTCCAATTGAGATGTGGCCTTGTAATGGACAGATCAAACTGCAGTTTCTGATTACTACCGTGAATGGTGCTGATAAGTTCACCATTTCAACCCACCAGTTAGCGAAAATTTCAAGTCCAACACTCACTTCGTGCAGGGGTGGTGCTACTAGTTTGTTGAAAGAGCATTTTTTTTCAACATCTTGA 891 0.4153 MAHPAVNGGGDNGIPMILTDPDVFVCCGCRDTLTIPIYECTKGHVILCSPCCNKHGYKCPFCSMFIGDKRCRAIEAVMESMKTVCCYAKHGCNAIVRYSEKRDHEKTCTFVPCLCPQPRCDWISNSNELGQHFKVKHFYKRIPFKYGEFFYVSLRRDTTTRVLQAVSDGKLFVISNDKREKKNSLILFHVGPNSWIPKFDYEVRATSDGAVLLPQTFVETTQGLKFEFSLLSFLHIPIEMWPCNGQIKLQFLITTVNGADKFTISTHQLAKISSPTLTSCRGGATSLLKEHFFSTS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00263 296 Pfam Seven in absentia protein family 70 204 IPR018121 GO:0005737|GO:0006511|GO:0007275
Gma09g00263 296 SUPERFAMILY TRAF domain-like 84 213 - -
Gma09g00263 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 133 IPR013083 -
Gma09g00263 296 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 11 256 IPR044286 -
Gma09g00263 296 ProSiteProfiles Zinc finger SIAH-type profile. 80 138 IPR013010 GO:0008270
Gma09g00263 296 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 11 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00263 Gma-Chr9 2416239 2423181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00263 22 137 C3H Transcription Factor Family AT2G41980 33.898 1.48e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00263 K04506 - gmx:102662420 560.451