Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00256 ATGGGACTCTTTTCTTCTACAAAACTGCTTCCAATTGTTGTGCTGTTTTCTCTTCTTTTCACATCTTATGCCACAAATTCAGCTGAAAACAACTTTGTTCACTGCCTTGTGAACCATTCTGAACCCTCTCACCCCATATCCGCAGCAATTTTCACACAAAACAGTTCCTCATTCTCTTCAGTGCTGCAAGCCTACATCAGAAACCTTCGTTTCAACACCTCCACAACCCGAAAACCATTCCTCATAGTGACCCCATTTCATGTTTCCCATGTGCAAGCATCCATTGTTTGTGCCAAAAAGCACAACTTGCTGATGAAAATCCGAAGTGGGGGACATGACTACGAAGGGGTGTCTTATGTGGCCTCACAGCCATTCTTCATCCTTGACATGTTCAATCTCCGATCCATCGAGATCGACATGGAATCCGAGACCGCGTGGGTCGAAGCCGGCGCAATGCTTGGTGAAGTTTATTATAGAATTGCTGAGAAGAGTAAGACTCATGGTTTTCCAGCAGGGGTTTGTCCCACTGTTGGTGTGGGAGGTCACATTAGTGGTGGTGGATATGGCAATCTCATGAGAAAATATGGCACTTCAGTGGACAATGTTGTTGATGCACAAATAGTGGATGCTCGGGGAAGGTTGCTGAATAGAAGAACCATGGGTGAAGATCTCTTTTGGGCTGTTAGAGGTGGTGGTGGAGGTAGCTTTGGTGTTGTTCTTGCCTACAAAATAAGGCTAGTTCGAGTTCCCGAAAAAGTCACTGTTTTCCAAGTTGGTGTAACCTTGGAGCAAAATGCCACTGACATAGTTTACAATTGGCAGCATGTTGCACCCACCATTGACAATGACCTTTTCATTAGGCTCATCTTGGAGGTGGTGAATGGTACACAAACTGCAACAAAGACTGTGAGGGCTACCTTCATAGCACTCTTCCTTGGTGATTCCAAAAGCCTTGTTTCTCTCATGAATGACAAGTTTCCTCAATTGGGTTTGAAGCAATCCGATTGCATCGAAACAACATGGCTTAAATCTGTGCTGTTTTGGGACAACATAGACATTGCAACCCCAGTTGAGATTTTGCTTGAAAGACAACCTCAGTCTTTTAAGTACTTGAAAAGAAAATCTGACTATGTGAAGAAGCCAATTTCCAAGGAGGGTTGGGAGGGGATTTGGAACAAGATGATTGAATTGGAGAAGGCAATAATGTATTTCAATCCTTATGGTGGAAGAATGGCTGAGATTCCATCAACAGAAACCGCTTTCCCTCACCGTGCCGGGAACCTATGGAAGATTCAGTACCAAGCAAATTGGTTTGAGGCAGGGGAAGAGGTAGCAGAATACCACATAAACTTGGTAAGAGAACTTCACAAATACATGACACCCTTTGTGTCTCAGAATCCAAGACAAGCTTTTATATGTTACAAGGACTTAGAATTGGGCATCAACCACCACGGTTTCTATGGCTACTTTGAAGGGAGTGCATATGGAGTCCAATATTTCGATGATAACTTCAAAAGGTTGGTTCAAATAAAGACCAAGGTTGATCCTAGCAATTTCTTCAGGACTGAACAAAGCATCCCGAGCCGCCTCACATTGGAACTCGCAAAGCGCCTCAACGATGAAATCGTTCGTGCTGACTCCGTCCAGTTTCACTCCCTCCGCATCATTCTGAGAACCTCCGCACTTGTTCAGTTACCGACGATGATTCCTGATGACTACGTCGGAAATGAAGAAGAAAAAGAAGGTGACTGTGGTTTCTAA 1761 0.4412 MGLFSSTKLLPIVVLFSLLFTSYATNSAENNFVHCLVNHSEPSHPISAAIFTQNSSSFSSVLQAYIRNLRFNTSTTRKPFLIVTPFHVSHVQASIVCAKKHNLLMKIRSGGHDYEGVSYVASQPFFILDMFNLRSIEIDMESETAWVEAGAMLGEVYYRIAEKSKTHGFPAGVCPTVGVGGHISGGGYGNLMRKYGTSVDNVVDAQIVDARGRLLNRRTMGEDLFWAVRGGGGGSFGVVLAYKIRLVRVPEKVTVFQVGVTLEQNATDIVYNWQHVAPTIDNDLFIRLILEVVNGTQTATKTVRATFIALFLGDSKSLVSLMNDKFPQLGLKQSDCIETTWLKSVLFWDNIDIATPVEILLERQPQSFKYLKRKSDYVKKPISKEGWEGIWNKMIELEKAIMYFNPYGGRMAEIPSTETAFPHRAGNLWKIQYQANWFEAGEEVAEYHINLVRELHKYMTPFVSQNPRQAFICYKDLELGINHHGFYGYFEGSAYGVQYFDDNFKRLVQIKTKVDPSNFFRTEQSIPSRLTLELAKRLNDEIVRADSVQFHSLRIILRTSALVQLPTMIPDDYVGNEEEKEGDCGF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00256 586 SUPERFAMILY FAD-binding/transporter-associated domain-like 23 250 IPR036318 GO:0050660
Gma09g00256 586 Pfam Berberine and berberine like 470 527 IPR012951 GO:0016491|GO:0050660
Gma09g00256 586 Gene3D - 138 527 IPR016169 -
Gma09g00256 586 PANTHER BERBERINE BRIDGE ENZYME-LIKE 8 21 528 - -
Gma09g00256 586 Gene3D - 26 133 IPR016167 -
Gma09g00256 586 PANTHER OS08G0158400 PROTEIN 21 528 - -
Gma09g00256 586 Pfam FAD binding domain 81 215 IPR006094 GO:0050660
Gma09g00256 586 Gene3D - 252 466 - -
Gma09g00256 586 ProSiteProfiles PCMH-type FAD-binding domain profile. 75 249 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00256 Gma-Chr9 2351778 2359763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00256 21 528 Miscellaneous Gene Families AT1G01980 53.101 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00256 - - gmx:100803041 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01244 15 10858305 10868457 Gma09g00256 09 2351778 2359763 GST