Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00203 ATGAAGGAAGGTGGTGGTAGAAAGCAAGGTGCAGCCTCACCTTGTGCTGCATGCAAGCTTCTGAGGAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCATATTTTCCAGCAGATGAACCACAAAAGTTTGCAAATGTGCACAAGGTGTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACCTACCGATGCATCAACGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCCAGAGTCCGAGACCCTGTTTATGGGTGTGTTGGGGCCATCTCTTCGCTTCAGCAACAGATTGATGTTGTTACAGACCCAATTGGCCCGGGCCCAGGCTGA 339 0.5015 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVVTDPIGPGPG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00203 112 Pfam Lateral organ boundaries (LOB) domain 14 103 IPR004883 -
Gma09g00203 112 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 103 - -
Gma09g00203 112 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 103 - -
Gma09g00203 112 ProSiteProfiles LOB domain profile. 13 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00203 Gma-Chr9 1761761 1765576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00203 1 102 AS2 family AT1G31320 93.137 1.03e-66 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma09g00203 LOB 5.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00203 - - gmx:100794219 213.001