Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00191 ATGTCTTCATTTGGCAGTGGTGATCTTATTCAAAATTTTGGAATGAGTGTCAACACAAGCATTACAACTATTGTAGGACGTGTACTTGGTTCTCCAGAGTTGAAGTTAGGTGATCCAAATAGAAAGATCATCAAATTAACAGTGGATATGGAGAAATGTCACTGGAATCTTTCTGGAAGATCAATGGTGGAAGGTAAACCGATTGAGTATTGGGGCATTCTTGATTTCACTAGTTGTGGTTCATATAAGTACAAATTAAGAGGAAAGGAATTCATTCAAAAGCTTATAGGTAAATACAAGAAATTGGGTATATACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTGCAAGTTATGATTTGCTATCCGAATTACTTGAAAAAATTAACAACATTTGTAAATATAACCAAGCTCACCTGCAACTTCTTCTGTGTGTAATGGCTAAAAAAAGTCCTGGTTATAAGTACCTCAAGTGGATTTCTGAGACCAAACTTGGGATAGTGACACAATGCTGCTTGTCTAATAGTGCTAATGAAGGGGAGGACAAATTTTATACTAATCTGGCTCTCAAGATCAATGCCAAGCTTGGAGGCAGTAACCTGGAGCTCAGGGTTGATGTCAACCATCCTGGCTATCAAGACACCAGGAGTCCATCGATTGCTGCTGTGGTTGCTACTGTTAATTGGCCTGCTGCAAATCGTTATGCAGCACGTGTTTTCCCACAATACAATCGAAGTGAGAAAATATTGAACTTTGGGGATGTTTGTCTTGAGCTTGTTGCATGCTATAGGAGGATGAATGGAGTTAGGCCAGAAAGAATTGTTATTCGTGATGGCGTGATTGTGGACACAAAAGTTATACACCCTTTTGAGTTTGACTTCTACCTTTGTAGTTACTATGGAAACCTAGGTACAAGCAAGCCAACTCATTACCATGTCTTATGGGACAAGAACAAGTTTACATCTGATGAATTGCAGAAGCTAATATACGAGATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCTTTAGTTCCTTCTGTGTATTATGTTGACCTTGCTGCTTATAGAGGACGATTATACCGTGAAGCAAGGATTGGGATGCAATCTCCAAAGTCAACAGCATCTTCATCTTCTAAAGATGCTTCATCAGCTTCACGAACTGCTTCATTTGAACTGGGATTTTACACATTGCATGCTGACCTGGAAAACATAATGTTCTTGATCTAA 1245 0.3888 MSSFGSGDLIQNFGMSVNTSITTIVGRVLGSPELKLGDPNRKIIKLTVDMEKCHWNLSGRSMVEGKPIEYWGILDFTSCGSYKYKLRGKEFIQKLIGKYKKLGIYMQEPIWYEESSMKILASYDLLSELLEKINNICKYNQAHLQLLLCVMAKKSPGYKYLKWISETKLGIVTQCCLSNSANEGEDKFYTNLALKINAKLGGSNLELRVDVNHPGYQDTRSPSIAAVVATVNWPAANRYAARVFPQYNRSEKILNFGDVCLELVACYRRMNGVRPERIVIRDGVIVDTKVIHPFEFDFYLCSYYGNLGTSKPTHYHVLWDKNKFTSDELQKLIYEMCFTFAKCTKPVSLVPSVYYVDLAAYRGRLYREARIGMQSPKSTASSSSKDASSASRTASFELGFYTLHADLENIMFLI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00191 414 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 283 413 - -
Gma09g00191 414 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 6 284 - -
Gma09g00191 414 SUPERFAMILY Ribonuclease H-like 138 368 IPR012337 -
Gma09g00191 414 Gene3D - 28 207 - -
Gma09g00191 414 SMART Piwi_a_2 146 368 IPR003165 GO:0003676
Gma09g00191 414 Pfam Piwi domain 280 364 IPR003165 GO:0003676
Gma09g00191 414 Gene3D - 283 413 IPR036397 GO:0003676
Gma09g00191 414 Gene3D - 208 282 IPR036397 GO:0003676
Gma09g00191 414 ProSiteProfiles Piwi domain profile. 285 368 IPR003165 GO:0003676
Gma09g00191 414 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 283 413 - -
Gma09g00191 414 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 6 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00191 Gma-Chr9 1634060 1635507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00191 280 410 Eukaryotic Initiation Factors Gene Family AT5G43810 48.092 5.59e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00191 K11593 - gmx:100783571 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01178 15 10131608 10136461 Gma09g00191 09 1634060 1635507 GST