Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00180 ATGGCAAACGCCGCATCTGGTATGGCAGTCCATGATGACTGCAAGTTAAGGTTTTTGGAGCTGAAGACAAAGAGGACACACCGTTTCATAGTTTTTAAGATTGAGGAGCAGCAGAAGCAGGTCATTGTGGAGAAGCTTGGTGAGCCAGCCCAAGGCTATGAAGATTTCACTGCCAGCCTTCCTGCTGATGAGTGCCGTTATGCTGTTTATGATTTTGAGTATCTGACTGAAGGGAATGTCCCTAAAAGCAGAATTTTTTTCATTGCATGGTCCCCTGACACATCAAGGGTGAGGAGCAAGATGATCTATGCAAGCTCCAAAGACAGATTCAAGAGGGAGCTGGATGGAATTCAAGTAGAGCTGCAAGCAACTGATCCTACTGAGATGGAACAAAATCTTATTGGAATCGGTATTCTTCGAACAAGACACGAAATTGTGTACTTTAGAGAGCGAGAAGAAGAAGCATACTGTGCTTTTACTTGTGCCTTTCGGTCTGAGAAGACCCAAAATCACGATCAGGAGGTGCAATTAATTGGGTGGGGAAAGGGGATAGGAGTCCTATGTTTGATGGAAGAGTCCTCTCTCTGCTGCGAACAATTGCCAGATGGGGAATGCATTGAGGTGGTTCAGAAAGACAAAGAAGACGATACACTGATTGAATTGGACTGTCAAAATGGTTTTCCTGAAGGAAGAAAGGAGTTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCGTACGACGACGCTTACAATTATTACATCTGTTATGCCAAGGAGGTGGGGTTTCGCGTGAGGGTGAAGAATTCGTGGTTCAAGCGGAACAGCCGGGAAAAATATGGTGCGGTGCTTTGCTGTAGCAGCCAGGGTTTCAAGAGAATGAAGGTCGTTAATCATTTGAGGAAAGAGACGAGAACTGGTTGTCCCGCGATGATAAGGATGAGGTTGGTGGAGTCTCAGAGGTGGAGGGTGCTTGAGGTTACGCTTGAACATAACCACATGTTAGGTGCTAAGATACTCAGGTCGGTTAAGAAGATGGGAAATGGAACAAAGAGGAAGCCGTTGCCTTGCTCTGAAGCTGAGGGGCAGACGGTTAAGTTATATCGTGCACTTGTGATAGATGCTGGAGGTAATGGAAATTCAAACTGCGGTGCAATTGAGGACAGAACTTTCTCTGAGTCTTCTAATAAGTTGAACCTTAGAAAAGCTCTTCACAAGAAGCACAAGGAAGAATCTTTTTCAGATATTGAATCAAGGAGCTCAAGCCCCTTGCTGAAAACCAGATGTTCCTTTGAATTGCAGCTCTCTAGAATGTACACAAGAGAAATGTTTATGAAATTCCAGTTAGAAGTGGAAGAGGTGTATTCTTGTTTTGGTACAACACAATTGCATGTGGATGGCCCCATCATAATTTTCTTGGTCAAGGAGCGTGTTTTGATTGAGGGAAACCGACGGGAGATTAGGGATTTTGAAGTTTTGTACAGTAGGACAGCTGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTATGTAGGCATGCATTGTGTGTGCTCAATTTTAATGGGGTTGAAGAGATACCTCACAAATACATTCTTTCACGATGGAAGAAAGATTACAAGCATCCTAATCACAGCTCTGGTGGTGCTAATGATACTGACTGCACTAATGATACCGACCGCATTCAATGGTCTAATCAGTTATTTAGAAGTGCCTTACAAGTTGTGGAGGAGGGGATACTTTCTCTAGACCATTACAATGTAGCGTTACAATCTTTAGAAGAATCACTGAGTAAGGTTCATGATGTAGAACAGAGACAGGAGTAA 1833 0.4343 MANAASGMAVHDDCKLRFLELKTKRTHRFIVFKIEEQQKQVIVEKLGEPAQGYEDFTASLPADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMEQNLIGIGILRTRHEIVYFREREEEAYCAFTCAFRSEKTQNHDQEVQLIGWGKGIGVLCLMEESSLCCEQLPDGECIEVVQKDKEDDTLIELDCQNGFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRMKVVNHLRKETRTGCPAMIRMRLVESQRWRVLEVTLEHNHMLGAKILRSVKKMGNGTKRKPLPCSEAEGQTVKLYRALVIDAGGNGNSNCGAIEDRTFSESSNKLNLRKALHKKHKEESFSDIESRSSSPLLKTRCSFELQLSRMYTREMFMKFQLEVEEVYSCFGTTQLHVDGPIIIFLVKERVLIEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHKYILSRWKKDYKHPNHSSGGANDTDCTNDTDRIQWSNQLFRSALQVVEEGILSLDHYNVALQSLEESLSKVHDVEQRQE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00180 610 SMART adf_2 12 139 IPR002108 GO:0003779
Gma09g00180 610 Gene3D Severin 1 137 IPR029006 -
Gma09g00180 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 209 374 IPR031052 GO:0006355
Gma09g00180 610 Pfam Cofilin/tropomyosin-type actin-binding protein 14 132 IPR002108 GO:0003779
Gma09g00180 610 SMART 26again6 500 527 IPR006564 GO:0008270
Gma09g00180 610 SUPERFAMILY Actin depolymerizing proteins 2 133 - -
Gma09g00180 610 Pfam FAR1 DNA-binding domain 251 334 IPR004330 -
Gma09g00180 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 401 606 - -
Gma09g00180 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 209 374 - -
Gma09g00180 610 CDD ADF_cofilin_like 6 134 IPR017904 GO:0015629|GO:0030042
Gma09g00180 610 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 401 606 IPR031052 GO:0006355
Gma09g00180 610 Pfam SWIM zinc finger 478 521 IPR007527 GO:0008270
Gma09g00180 610 ProSiteProfiles Zinc finger SWIM-type profile. 489 525 IPR007527 GO:0008270
Gma09g00180 610 ProSiteProfiles ADF-H domain profile. 5 139 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00180 Gma-Chr9 1537974 1543947 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma09g00180 Cofilin_ADF 4.2e-34 CL0092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00180 - K17604 gmx:100814986 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01168 15 10024090 10026222 Gma09g00180 09 1537974 1543947 GST