Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00164 ATGTACCCGAGGCTCATACACCCCCACGATGGGATTGTGACGCAGGATGAGTTGCAGGGTGGTGCTGCTTCCAACCTCTCTCACGCTCACAAGGGTGACCCTTGTCTCGTTTTAACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGCTTCGTTGATGCGGTCACGCAGCTTGGTGGAGCTAGTAAAGCTACACCAAAAGCAATCATGCGGACTATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATGTGGGCGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGTGCTGATAACACTTCTCCAAAGTTGCCAACTCCTGATACAAATGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCGGAAAAGCACTTGCAGATTCGCCAGGATGCAGAGAGGAGATACATGGCGATGCTCGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCAGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGAATTGGAAGCAAAGCACCTAGAGGTACCTTGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCCACTGAGGTAGCCGGAGTGAATGTCCCGGAAGAAGAAATACTGCCAAGTCTCCCACCCCAAAGGGCCGATTGTTCAACCGAAAGTTGTTTAACCTCGCATGAGAGCTCTGGAGGATTGGCTTTAGAAGGATCTCCAGGCGAGGGAAAAAGGAGGATGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCTCAAGGTAATCATCCTCAAGGAATAACTAGTAGCCCCCTAAGAAAACGATTAATTTCATCGGAGGGTATCACTGTGTATGAAGAGAGAGAAAGGAGGAGCACAGCACTACACAGCTCCGAAATAGGAGGGGGAGAAATTTTGTATGCGTTGGATTTCGTAGATCTGATTCATGGTCAGCACATAGATTGTGGTGGCAGCACAATGGATCCTGGCAGTGGAGGAAACAGTCTTGGCAACAACTCTAATCTCGCTTCAAAACAACGTTTACGGTGGACACATGAATTACATGAGCGCTTTGTTGATGCTGTGGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGCCATTTACAGAAATACCGACTTGCAAAATATTTACCTGACTCCTCATCTGATGAAGGGAAAAAGGCTGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTTGATGGTTCATCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTTCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTACGGATAGAGGCCCAGGGTAAATACCTGAAAAAGATAATCGAAGAACAGCAGCGGCTCAGTGGCGTTCTTTCGGAGACTCCTGGCTCTGGGGTTGCAGCCGTTGCTCCAGGGGATGCATGCCAAGAACCTGATAATAAGACTGACCCGTCAACCCCTGACCCTGAAAAGGCCGCCAAAGACCGTGCTCCGGCAAAAAGTCTTTCAATAGAATCTTTTTCATCTCACCTTGAACCGATGACACCAGATTCTGGCTGCCATGTTGGTTCCCCTGCTGAAAGCCCTAAAGGGGAGAGATCAGCCAAGAAGCAACGAGTAATCATGGATGGCGTGTATTCTAAACCAGAAATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATTATACCAGCAACCTAACACTGTTTTTCTTGGCCAAGACCAATTTGATCCTTCTTTGGGTATATCTACCAGAAGTGGTGAGGAATTGGATAAGGTTGGTGGTGGTAATCTGTGA 2004 0.4691 MYPRLIHPHDGIVTQDELQGGAASNLSHAHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDVGEGCKDGSYLLESPGADNTSPKLPTPDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFISATVIDTDSQKFQGIGSKAPRGTLVDPLGFYSLPSTEVAGVNVPEEEILPSLPPQRADCSTESCLTSHESSGGLALEGSPGEGKRRMLGMDSMAAPLIWSEAKMRTQAINVAQGNHPQGITSSPLRKRLISSEGITVYEERERRSTALHSSEIGGGEILYALDFVDLIHGQHIDCGGSTMDPGSGGNSLGNNSNLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSETPGSGVAAVAPGDACQEPDNKTDPSTPDPEKAAKDRAPAKSLSIESFSSHLEPMTPDSGCHVGSPAESPKGERSAKKQRVIMDGVYSKPEMVLPHQILESSMSLYQQPNTVFLGQDQFDPSLGISTRSGEELDKVGGGNL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00164 667 MobiDBLite consensus disorder prediction 550 565 - -
Gma09g00164 667 MobiDBLite consensus disorder prediction 447 464 - -
Gma09g00164 667 Coils Coil 477 497 - -
Gma09g00164 667 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Gma09g00164 667 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 387 442 IPR006447 GO:0003677
Gma09g00164 667 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Gma09g00164 667 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 310 - -
Gma09g00164 667 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 373 512 - -
Gma09g00164 667 MobiDBLite consensus disorder prediction 447 470 - -
Gma09g00164 667 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Gma09g00164 667 Pfam MYB-CC type transfactor, LHEQLE motif 474 520 IPR025756 -
Gma09g00164 667 MobiDBLite consensus disorder prediction 245 262 - -
Gma09g00164 667 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 310 IPR044848 GO:0003700
Gma09g00164 667 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 373 512 IPR044848 GO:0003700
Gma09g00164 667 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 384 444 IPR017930 -
Gma09g00164 667 MobiDBLite consensus disorder prediction 525 606 - -
Gma09g00164 667 SUPERFAMILY Homeodomain-like 386 441 IPR009057 -
Gma09g00164 667 Gene3D - 386 445 - -
Gma09g00164 667 Gene3D - 42 100 - -
Gma09g00164 667 MobiDBLite consensus disorder prediction 240 273 - -
Gma09g00164 667 MobiDBLite consensus disorder prediction 101 132 - -
Gma09g00164 667 Pfam Myb-like DNA-binding domain 390 440 IPR001005 -
Gma09g00164 667 Pfam Myb-like DNA-binding domain 46 96 IPR001005 -
Gma09g00164 667 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00164 Gma-Chr9 1381869 1399026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00164 422 667 G2-like Transcription Factor Family AT2G01060 60.227 4.62e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma09g00164 Myb_DNA-binding 5.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00164 - - qsu:112015623 875.93