Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00144 ATGTCTTTGTCTGTGGAAGACAACTACTATGGCATGAGCAGCAGTGTGAGTGAGATAGAGGAAGAGAATTCTTCACACTTGCACTTGAATAATGATGGTCCTAATCCTATGGTCACCATTGGTGAAGAAGAGAACGAGGATGATGATGACACTGTTTATGTGGCTGTTGGTAAGAGCCAGAGTAGCACGGAGGCCTTGGCATGGACCCTCAACAACTTGGCCACTCCTTCTACCATGCTCTTTATCATACACGTTTTCCCTGAGATCAAGCTCCTTCCGAATCCATTGGGGGTGGGAATGATTCCAAAGGACCAAGTGAGTCCTGAGCAGGTAGAGAGCTATATGGCTCAAGAAAGAGGCAACAGGAGAGAGCTTCTAAACAAATTCCTCCAATTATGCTCTGCTTCCAAGGTTAAGGTGGACACCATCCTGATTGAGAGTGACCTGATTGCAAAGGCTATCATTGACCTTATTCCAATTCTTCAAATAAAAAAACTAGTGATTGGAGCCAACAAATCCCAAATAAGAAAACTGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGGTACTTCAGAATGCTCCAGAAAGTTGCAAGGGGAAACCAAGTGAAGATTCAGAGGAGCTATTTGAGATCAATCTTAAGGAGCCATATTTGGATACAATATCAGAAGAAAACTTCGAGAGCAGTGTGTTCCTTTCTGATATTCACATCAACGACAAAGATGTTGTTCATGTGGCAGTTGACCACGTTGGAGAATCAAGCATGGAAGCACTTTTATGGACTTTGAATCATGCTCTGACACCCTCTACCACTGTCTATCTCTTACTCGTTTTCCCCGAAATTAGGCTCGTCCCAAGTCCATTTGATTTATGTTCTtatgatttTCATGTAAATCCAGAGTATGTTAACTTTCACTTGACACAACGGAAAAGCAAGACAAAAGTGTTCCTTCAAAAGTTCATTGAATTGTGCCTTGATTCAAAGGTTAAGGTGGAGATTATACTTACTGAGGGTGACAACATTGCCAAAACTATAACTGACAATGTTAGAGATCATAGTATAAGGAAATTGGTGATCGGAATTACCAAATCTAATTTAAGCAAATCCGTCTCTAGAAGGCGAAATGCCATAGCAGATAAGGCCCTCAAGAATGCACCAGAAATCTGTGATATTAAAATAATATGCGATGGAAAAGAAGTGATTGATCAAATGATTGGTTGCAACTCATCATGTTCCAGTGACTTAACAGTTCCAGAGCACCAGAAGAAAATGAATCCTGTGGTTTTGTTCCTCTTATGTGTTTTGTGCCCAATCCTATATGGTTATTTAGACCAAGATTTTGATCATTGA 1353 0.4065 MSLSVEDNYYGMSSSVSEIEEENSSHLHLNNDGPNPMVTIGEEENEDDDDTVYVAVGKSQSSTEALAWTLNNLATPSTMLFIIHVFPEIKLLPNPLGVGMIPKDQVSPEQVESYMAQERGNRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIKKLVIGANKSQIRKLRSRKGSGIADQVLQNAPESCKGKPSEDSEELFEINLKEPYLDTISEENFESSVFLSDIHINDKDVVHVAVDHVGESSMEALLWTLNHALTPSTTVYLLLVFPEIRLVPSPFDLCSYDFHVNPEYVNFHLTQRKSKTKVFLQKFIELCLDSKVKVEIILTEGDNIAKTITDNVRDHSIRKLVIGITKSNLSKSVSRRRNAIADKALKNAPEICDIKIICDGKEVIDQMIGCNSSCSSDLTVPEHQKKMNPVVLFLLCVLCPILYGYLDQDFDH 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00144 450 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 203 415 - -
Gma09g00144 450 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 46 199 - -
Gma09g00144 450 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 246 366 - -
Gma09g00144 450 Gene3D HUPs 50 198 IPR014729 -
Gma09g00144 450 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 46 199 - -
Gma09g00144 450 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 203 415 - -
Gma09g00144 450 CDD STK_N 51 199 - -
Gma09g00144 450 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 51 194 - -
Gma09g00144 450 MobiDBLite consensus disorder prediction 14 43 - -
Gma09g00144 450 Gene3D HUPs 233 366 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00144 Gma-Chr9 1188186 1193397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00144 252 420 Plant U-box Gene Family AT5G57035 26.901 1.85e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00144 - - gmx:102661258 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01130 15 9647296 9649413 Gma09g00144 09 1188186 1193397 GST
Gma17g00045 17 478904 480578 Gma09g00144 09 1188186 1193397 PCT