Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00140 ATGGGTGAACAATTAGGGCTACTAAAAGTCATGGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGACCAGTGATCCTTATGTAGTACTCAAACTAGGGAATCAGACTGCAAAGACCAAGGTAATTAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCATTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCTTGAACCTTCAACCAATAGTCTCTGCAGCCAGATTAAGAGACATCTTAAGAGTGTCCTCTGGTGAGACAACATTAAGGAAGGTCATACCTGATGGTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAACTGTGTCAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTTGAGTCTGGGGAACTAGAATTGACTATCAAGTTGGCCACACCTGTTGCTCCTGCAATATAG 501 0.4251 MGEQLGLLKVMVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPIVSAARLRDILRVSSGETTLRKVIPDGENCLVRESSINCVNGEVVQNVWLRLRGVESGELELTIKLATPVAPAI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00140 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gma09g00140 166 Pfam C2 domain 7 99 IPR000008 -
Gma09g00140 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 161 - -
Gma09g00140 166 Gene3D C2 domain 3 162 IPR035892 -
Gma09g00140 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Gma09g00140 166 PRINTS C2 domain signature 22 34 IPR000008 -
Gma09g00140 166 PRINTS C2 domain signature 46 59 IPR000008 -
Gma09g00140 166 PRINTS C2 domain signature 67 75 IPR000008 -
Gma09g00140 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 161 IPR044562 -
Gma09g00140 166 CDD C2_ArfGAP 5 150 - -
Gma09g00140 166 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00140 Gma-Chr9 1148349 1149913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00140 1 157 C2H2 Transcription Factor Family AT4G21160 43.312 1.85e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00140 - - gmx:100499880 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01125 15 9611366 9614054 Gma09g00140 09 1148349 1149913 GST
Gma07g02587 07 48078338 48079777 Gma09g00140 09 1148349 1149913 PCT