Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00113 ATGCAAACTTCTAAGAAGCACCCAACTTCAGCTGGTATCCATTTATACCTGCAGCCTGCACAAGATATTGATCCTTACACTCATTACCAAATATTGCAAAGCAATTCATGCCATGACAATAGCAGCAGCCAGGGAACCACTATTTCTTTTGAAACCAGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCATCCAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCAGACCAGCATCAGTCATCAGACAACACCTATGGATCACCAACAAGTGCACACTCTAGATATGATGATGACGGCTACGAATTGAAGAACAAGCTTAGAGAACTCGAGATTTCGTTGTTGGGGCCTGATTCAGACATTGTTGATAGTTGGCACTGCTCCTACAAGGGTGGCCGCCACAGAGCATCATCTCCAACGGCTAAACACAATTGGGATCAGATTGTGGAAATGATTCCAAAATTAGACTTGAAAGAAGTCCTCATTCGGTGTGCACAAGCCGTGGCAGATGATGATATTGAAACAGCAGTGGGATTTATGAACAATGTATTGGCAAAGATGGTATCAGTTGGGGGTGATCCGATCCAGAGGTTAGGTGCCTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCCTCAGGGAGCATAATCTACAAGGCCTTGAAATGTGAACAACCAACAAGCAATGATCTCATGACTTACATGCACATCCTGTACCAGATTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGCTGTCATTGGAGAAGCAATGCTGAATGAATCAAGAATTCACATAATTGACTTCCAAGTTGCACAGGGCACTCAGTGGCTGTTGCTTATTCAGGCTCTTGCATCTCGTCCAGGTGGAGCACCTTTCATTCGTGTAACCGGAGTTGATGATTCACAATCATTTCATGCAAGGGGTGGAGGACTTCACATTGTAGGAAAACGCCTCTCAGATTATGCCAAATCTTGTGGAGTTCCATTTGAGTTCCACAGTGCTGCTATGTGTGGAAGTGAGCTTGAACTAGAAAACCTTGTAATTCAACCCGGGGAAGCTCTAGTTGTGAACTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCATAGGGACAGGCTATTGAGACTGGTCAAAAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGTTGAGACCTTGAGTTACTACACTGCTATGTTTGAGTCCATAGATGTGGCCCTCCCCAGAGATGATAAGCAAAGGATCAATGCAGAACAACACTGCGTGGCTCGCGACATCGTCAACATGGTAGCTTGTGAGGGGGATGAGAGGCTGGAAAGGCATGAACtcttagggaagtggaggtcaagattttcaatggctggttttgcaccatgccctttgagttcctcagTCACAGCTGCAGTTAGGAATATGTTGAATGAATTCAATGAAAATTATAGGCTTCAACATAGAGATGGCGCTCTTTATCTAGGATGGAAGAGTAGAGCTATGTGTACCTCTTCTGCTTGGAGATGTTACTGA 1647 0.4262 MQTSKKHPTSAGIHLYLQPAQDIDPYTHYQILQSNSCHDNSSSQGTTISFETSKEQYFTLESSPAINDLIGCDSPSYASVSSNRSPFSPQASHSDQHQSSDNTYGSPTSAHSRYDDDGYELKNKLRELEISLLGPDSDIVDSWHCSYKGGRHRASSPTAKHNWDQIVEMIPKLDLKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIHIIDFQVAQGTQWLLLIQALASRPGGAPFIRVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELELENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYRLQHRDGALYLGWKSRAMCTSSAWRCY 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00113 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 545 IPR005202 -
Gma09g00113 548 MobiDBLite consensus disorder prediction 80 116 - -
Gma09g00113 548 Pfam GRAS domain family 175 546 IPR005202 -
Gma09g00113 548 ProSiteProfiles GRAS family profile. 166 546 IPR005202 -
Gma09g00113 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 545 - -
Gma09g00113 548 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00113 Gma-Chr9 913479 917248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00113 1 546 GRAS Transcription Factor Family AT4G17230 59.199 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma09g00113 GRAS 2.6e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00113 - - gmx:100817987 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01095 15 9227178 9231080 Gma09g00113 09 913479 917248 GST
Gma17g00068 17 650025 651662 Gma09g00113 09 913479 917248 PCT