Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00089 ATGGCAGGGTCATGTTTCCACGGGCTTAGGCTAAGGATGTCTAAGAGTAAAGCTTTAGCGGAGCCTTCATCTTCTTCCAAGACCCAGTTGGAGAGTGACGCGGAGAACGTGGAAAGGAAGAGATTTGATAGCATGGAATCGTGGTCATTGATATTCGACTCAATGGAGACATGGGAGACTTCAAAGGAGGACCAGAAAGGGGAGCAAGAGGAATGGGCTGCAGACCTGTCACAGCTTTTTATAGGTAGCAAGTTTGCTTCTGGAGCTCACAGCCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAAGATTCCAACTCAGGATGAGGAGAAAAAGGCCTTACTGGAGGAGCAATTTAACTTTGAAGTGGCTTTGCTTTCACGTCTCATTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCCGTATACTGTATCATAACAGAATACATGTCACAAGGGACTCTGAGGATGTATCTAAACAAGAAAGAGCCGTACTCACTCTCAATTGAAACAATACTAAGGTTAGCTCTAGATATATCAAGGGGTATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAGTAATTTGCTTCTCGACGATGACATGAGAGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACAAGATGCCGGAAAGGCAAAGGAAACTCGGGAACATATCGTTGGATGGCACCGGAGATGGTTAAGGAAAAACCTTATACTCGGAAGGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACAACTTCTCTGCTTCCCTTCCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCCAGTTGTCAACCAGCACTAGCACATCTGATAAAGCGTTGCTGGTCAGCAAACCCCTCAAAAAGGCCAGATTTCAGTGATATTGTGTCTACTTTGGAGAAGTACGATGAGTGTGTGAAAGAGGGCCTGCCACTGAGTCATAATCATTCAGGGCTAGTCAGCAGAAATGTAATTATTGAACGCCTAAAAGGTTGTGTATCAATGAGCTCCTCCATACCTGTACATGCTTGA 1134 0.4497 MAGSCFHGLRLRMSKSKALAEPSSSSKTQLESDAENVERKRFDSMESWSLIFDSMETWETSKEDQKGEQEEWAADLSQLFIGSKFASGAHSRIYRGVYKQRAVAVKMVKIPTQDEEKKALLEEQFNFEVALLSRLIHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKGKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSTLEKYDECVKEGLPLSHNHSGLVSRNVIIERLKGCVSMSSSIPVHA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00089 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gma09g00089 377 Gene3D Transferase(Phosphotransferase) domain 1 162 355 - -
Gma09g00089 377 Pfam Protein tyrosine and serine/threonine kinase 81 333 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 ProSiteProfiles Protein kinase domain profile. 79 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00089 377 SMART serkin_6 79 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00089 377 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 PRINTS Tyrosine kinase catalytic domain signature 241 251 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Gma09g00089 377 CDD STKc_MAP3K-like 86 333 - -
Gma09g00089 377 SUPERFAMILY Protein kinase-like (PK-like) 53 333 IPR011009 -
Gma09g00089 377 MobiDBLite consensus disorder prediction 15 39 - -
Gma09g00089 377 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 365 - -
Gma09g00089 377 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 365 - -
Gma09g00089 377 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00089 Gma-Chr9 729858 735364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00089 1 377 MAP Kinase Kinase Kinase AT1G62400 76.650 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma09g00089 PK_Tyr_Ser-Thr 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00089 - - gmx:100810171 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01068 15 9029319 9034290 Gma09g00089 09 729858 735364 GST
Gma17g00083 17 758993 762437 Gma09g00089 09 729858 735364 PCT