Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00073 ATGGAGGGTGGTAGTAGTAGCTCTAATGGCACTTCTTATCTGTTGGCTTTTGGAGAAAACAACAGTGGTGGGCTATGCCCAATGACGATGATGCCTTTGGTGACTTCCCATCACGCTGGTCATCATCCAATAAATCCTAGTAATAATAATAATGTAAACACAAACTGTCTCTTCATTCCCAACTGCAGTAACAGTACTGGAACTCCTTCTATCATGCTCCACAATAATCACAACAACAACAAAACTGATGATGATGATAACAACAACAACACTGGGTTAGGGTACTATTTCATGGAGAGTGACCACCACCACCATCACCACGGCAACAACAACAACAATGGAAGCTCCTCCTCCTCCTCCTCTTCTGCTGTCAAGGCCAAGATCATGGCTCATCCTCACTATCACCGTCTCTTGGCAGCTTACGTCAATTGTCAGAAGGTTGGGGCCCCGCCTGAAGTGGTGGCAAGGTTAGAAGAAGCATGTGCTTCTGCAGCGACAATGGCTGGTGGTGATGCAGCAGCTGGATCAAGCTGCATAGGTGAAGATCCAGCTTTGGATCAGTTCATGGAGGCTTACTGTGAGATGCTCACAAAGTATGAGCAAGAACTCTCCAAACCCTTAAAGGAAGCCATGCTCTTCCTTCAAAGGATCGAGTGCCAGTTCAAAAATCTTACAATTTCTTCCTCCGACTTTGCTAGCAATGAGGGTGGTGATAGGAATGGATCGTCTGAAGAGGATGTTGATCTACACAACATGATAGATCCCCAGGCAGAGGACAGGGATTTAAAGGGTCAGCTTTTGCGCAAGTATAGCGGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAGAGGAAGAAAGGAAAGCTACCTAAAGAAGCAAGGCAACAATTACTTGAATGGTGGAACAGACATTACAAATGGCCTTACCCATCCGAATCCCAGAAGCTGGCTCTTGCAGAGTCGACAGGTCTGGATCAGAAGCAAATCAACAACTGGTTTATTAATCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAGTTTGTGGTGATGGATCCAAGCCATCCACACTATTACATGGATAATGTTCTAGGCAATCCATTTCCCATGGATCTTTCCCATCCCATGCTCTAG 1140 0.457 MEGGSSSSNGTSYLLAFGENNSGGLCPMTMMPLVTSHHAGHHPINPSNNNNVNTNCLFIPNCSNSTGTPSIMLHNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNNGSSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNGSSEEDVDLHNMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLGNPFPMDLSHPML 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00073 379 SMART ELK_2 261 282 IPR005539 GO:0003677
Gma09g00073 379 MobiDBLite consensus disorder prediction 75 125 - -
Gma09g00073 379 ProSiteProfiles ELK domain profile. 261 281 IPR005539 GO:0003677
Gma09g00073 379 SUPERFAMILY Homeodomain-like 283 359 IPR009057 -
Gma09g00073 379 MobiDBLite consensus disorder prediction 110 125 - -
Gma09g00073 379 Pfam ELK domain 261 282 IPR005539 GO:0003677
Gma09g00073 379 Pfam Homeobox KN domain 301 340 IPR008422 GO:0003677|GO:0006355
Gma09g00073 379 Pfam KNOX2 domain 178 225 IPR005541 GO:0003677|GO:0005634
Gma09g00073 379 SMART KNOX2_2 175 226 IPR005541 GO:0003677|GO:0005634
Gma09g00073 379 PANTHER - 1 368 - -
Gma09g00073 379 ProSiteProfiles 'Homeobox' domain profile. 281 344 IPR001356 GO:0003677
Gma09g00073 379 Pfam KNOX1 domain 123 162 IPR005540 GO:0003677|GO:0005634
Gma09g00073 379 ProSitePatterns 'Homeobox' domain signature. 319 342 IPR017970 GO:0000981|GO:0006355
Gma09g00073 379 CDD homeodomain 293 345 IPR001356 GO:0003677
Gma09g00073 379 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 368 - -
Gma09g00073 379 SMART KNOX1_2 122 166 IPR005540 GO:0003677|GO:0005634
Gma09g00073 379 SMART HOX_1 283 348 IPR001356 GO:0003677
Gma09g00073 379 Gene3D - 279 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00073 Gma-Chr9 550513 557425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00073 95 379 Homeobox Transcription Factor Family AT1G62360 77.133 1.03e-134 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Gma09g00073 KNOX2 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00073 - - gmx:547796 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01052 15 8848438 8855451 Gma09g00073 09 550513 557425 GST
Gma17g00091 17 832289 837097 Gma09g00073 09 550513 557425 PCT