Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00068 ATGGATATGCAAGCATCAAATGAATTTCTTGCAGAATTGAAGGTTCTGACACACGTCCATCACTTGAACTTGGAGCGGTTAATAAGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTACATTGAGAACGGCTATTTAAGTCAACATTTGCGAGGCTCAGGAAGGGATCCGTTAACATGGGCAGCTAGAGTTCAAATTGCTCTTGATGCAGCAAGAGGACTGGAATATATCCATGAGCACACAGTTCCTGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATTGACAAAAACTTCCGTGCAAAGGTTTATAAATGCATTTCCAGATTTTACATCCATAAAAAAGTTGAATTCTGTCATGTTGAGTCCAACTTTTTACCACAGGTTGCAGATTTTGGTCTCACAAAATTGACCGAATATGGTAGTTCTTCATTACATACGCGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATACGGTGATGTGTCCTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAAGCTATTGTCAAGATAAACGAACCTGAAAATGAATCAAAAGGACTATTTGAAGAAGTTCTTGGTCTGTCAGACCCGAATGAAGATCCTCGTCAACTTGTTGATCCTAGACTCTGTGACAAATTCCCTCTTGACTCGGTATTTAAGGTGTCTCAGCTTGCCAAAAATGAAAATTGCATTTCCAAGACAAGGAATCATCAGACTGAAGACAAGTTGGAGTTCTTAAGGCACTCAAATTCCTTTGGAATTCGAAAGGAACAAAATGATCAATATGCTTATAAGAGTCCAAAGTCAAGACAAAAAGACACTATGTCCTGTGTAAAGAACAGTACTGCACTAGGAATAGAACTTTCTGTTGTGCTAGGAGAACGGTCAAACCAATGTACTGATAACCTTACATACAAAATCCCAAGACGCCCAAGAGATTTTGGATCTTCAAAGAAGAGAAAGGTTCAAGATATTCACAAACTTGACATTATAAAATCGAAGTCAATGGGGGAAGATGTTTTGGTTTGCTCAAAGAGGACTGAACTTCCATTTAGGAAATGGCTAGAAGCAAAGAAGTGTCTTACTTCGTTGAAGAAGAAAAGAAAACTTGAAAACAATATCTTAATTAACAATTTGGAAGATAATAAAGTTTATGTTCCCTCAAAGACAAATTCCAGAAGCAAAGCTAGAAAAATGGATGATGTAAAGGATACTGAGCAAACTTCCAGAAGATGTCATCAATGCATGAAAAAGGAAAGAGCAGCATATGTACCTTGTACTAAATGTCAGAAAATGTTTCCGGATTTGTCAATAGAAGATATTGCACAAGAGTGTCCCTTTAGCCAAAAGAATTGCAACTGCAATGTTTGCTTGAGTTCAAGAGGAATGATCAAGGTGAATATTTTGACTCACACAGCTGAGGTAACGTTAACTGATGAACAGAACTCTGTTATTTCAAAACTGAAAAAAGCACACATTGCCCAAGATGAGAAAGAGCACCAAACAGGTGGTGCTCTTTGGGACATCTTTCGGAGAGAGGATATTGATATGTTAGAAGCATATCTAAGGAAACACTCTAAAGAATTTAGGCATACTTATTGTTCTCCAGTTGAACAGGTTATCCATCCAATTCATGACCAAAGTTTTTACTTGACTTTGGAACACAAGAAGAAGTTGAAGGAGGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGTCCACCACACCAAGTCAGGAATCTTAAGGTAAAACTCGAGATAAAGAAGATGATAGTCTATGCTGTTGACCATGCTGTCAAAGAATTCGAAGCTTTAGTTAGATGTTCTTGA 1920 0.3776 MDMQASNEFLAELKVLTHVHHLNLERLIRYCVEGSLFLVYEYIENGYLSQHLRGSGRDPLTWAARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVYKCISRFYIHKKVEFCHVESNFLPQVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVKINEPENESKGLFEEVLGLSDPNEDPRQLVDPRLCDKFPLDSVFKVSQLAKNENCISKTRNHQTEDKLEFLRHSNSFGIRKEQNDQYAYKSPKSRQKDTMSCVKNSTALGIELSVVLGERSNQCTDNLTYKIPRRPRDFGSSKKRKVQDIHKLDIIKSKSMGEDVLVCSKRTELPFRKWLEAKKCLTSLKKKRKLENNILINNLEDNKVYVPSKTNSRSKARKMDDVKDTEQTSRRCHQCMKKERAAYVPCTKCQKMFPDLSIEDIAQECPFSQKNCNCNVCLSSRGMIKVNILTHTAEVTLTDEQNSVISKLKKAHIAQDEKEHQTGGALWDIFRREDIDMLEAYLRKHSKEFRHTYCSPVEQVIHPIHDQSFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPPHQVRNLKVKLEIKKMIVYAVDHAVKEFEALVRCS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00068 639 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Gma09g00068 639 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 272 484 - -
Gma09g00068 639 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 485 520 IPR045109 GO:0032454|GO:0033169
Gma09g00068 639 SUPERFAMILY Clavaminate synthase-like 470 611 - -
Gma09g00068 639 Gene3D Cupin 462 633 - -
Gma09g00068 639 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 520 612 IPR045109 GO:0032454|GO:0033169
Gma09g00068 639 SUPERFAMILY Protein kinase-like (PK-like) 3 198 IPR011009 -
Gma09g00068 639 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 272 484 IPR045109 GO:0032454|GO:0033169
Gma09g00068 639 SMART cupin_9 446 627 IPR003347 -
Gma09g00068 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Gma09g00068 639 SMART serkin_6 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00068 639 Pfam Protein tyrosine and serine/threonine kinase 4 198 IPR001245 GO:0004672|GO:0006468
Gma09g00068 639 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00068 639 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 614 639 - -
Gma09g00068 639 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 485 520 - -
Gma09g00068 639 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 614 639 IPR045109 GO:0032454|GO:0033169
Gma09g00068 639 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 520 612 - -
Gma09g00068 639 Pfam JmjC domain, hydroxylase 520 616 IPR003347 -
Gma09g00068 639 Gene3D Transferase(Phosphotransferase) domain 1 44 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00068 Gma-Chr9 500812 507823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00068 1 245 Receptor kinase-like Gene Family AT3G21630 61.694 2.74e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma09g00068 PK_Tyr_Ser-Thr 1.5e-31 CL0016
TR Jumonji Gma09g00068 PK_Tyr_Ser-Thr 1.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00068 - K13429 gmx:100806955 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01046 15 8790458 8798192 Gma09g00068 09 500812 507823 GST