Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00026 ATGGAATCCTGCAATTGTATTGACCCACAAGTGCCAGCTGATGACTTATTGATGAAATACCAATATATCTCTGATTTCTTCATTGCCCTTGCTTATTTCTCAATCCCTTTGGAGCTTATCTACTTTGTTAAGAAATCAGCAGTATTTCCATATAGATGGGTCCTTGTTCAGTTTGGTGCTTTCATTGTTTTATGTGGAGCAACACATCTAATTAATTTATGGACATTTAGAATTCATTCAAGAACTGTGGCTGTTGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTATCGTGTGCAACTGCCCTCATGCTGGTACATATTATTCCTGATTTATTAAGTGTTAAAACTAGGGAATTATTTTTGAAGAACAAGGCTGCAGAGCTTGATAGAGAAATGGGCCTGATTCGCACACAAGAAGAAACTGGTCGACATGTTAGGATGTTGACTCATGAGATTAGAAGCACTCTTGATAGACACACAATATTGAAAACGACTCTTGTTGAACTGGGTAGAACTTTGGCACTAGAGGAATGTGCGTTATGGATGCCAACACGAACTGGTTTGGAGCTTCAACTCTCTTACACATTGCGACAGCAGAACCCAGTTGGATACACAGTACCCATTCATCTTCCTGTTATCAATCAAGTATTTAGTAGCAACAGGGCAGTAAAAATTTCACCTAATTGTCCAGTTGCTAGATTACGACCTTATGCTGGAAAATACATGCCTGGGGCAGTAGTAGCTGTTCGAGTTCCTCTCCTACATCTTTCTAATTTCCAAATATATGATTGGCCTGAGGTTTCGACAAGAAGTTATGCTTTGATGGTTTTGATGCTTCCATCAGATAGTGCTAGGCAATGGCATGTGCATGAGTTAGAACTGGTTGAGGTAGTCGCTGACCAGGTAGCTGTTGCTCTTTCACATGCTGCAATCTTAGAAGAGTCAATGAGGGCAAGGGATCAGCTCATGGAGCAGAATGTTGCATTGGATCTAGCAAGAAGAGAAGCAGAAACTGCAATTCGTGCTCGTAATGACTTTTTGGCTGTTATGAACCACGAGATGAGAACTCCCATGCATGCAGTTATTGCACTCTCTTCATTACTACAGGAAACAGATTTGACGGCTGAGCAACGTCTGATGGTGGAGACAATATTGAAAAGCAGCAATTTGTTGGCTACCCTCATCAATGACGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTCTTCAACTTGAAGCAACAACATTTAACCTCCATTCTTTGTTCAGAGAGGTCCTTAACTTGATTAAGCCTGTTGCATCTGTTAAAAAGTTATCACTCACTTCACATATAGCCTCAGATTTGCCAATGTATGCCATTGGTGATGAAAAACGTCTCATGCAAACTATTCTGAATGTTGTTGGTAATGCTGTGAAGTTCTCAAAAGAGGGCTGCATTTCCATCTCTGCTTTCGTTGCAAAGCCTGAATCCTTTAGAGATGCTAGAATTCCTGACTTTCTTCCAGTGCTAAGTGATAACCACTTTTATTTGCGAGTACAGGTAAAAGATTCAGGATCAGGAATTAATCCACAAGATATCCCAAAGATATTCACTAAGTTTGCACAAAACCAATCGTTAACAACAAGAAATCCTGCTGGAAGTGGACTTGGCCTGGCAATTTGTAGGAGGGTTAGCAGGACAGTAACAAAGGGACTTCTTATGCATTTAGGATGTGATGTAACCACAGCAAGCTCAAGTGAAGAATGTCTGCGTGTTGTTTCTCTGGAACATGAAGTGGTCTTCATGGATGTTTGTGCAGGGTTAGATGGTTATGAACTTGCAATCCGCATACATGAAAAGTTTACTAAACATCAAGATAGACCACTAATAGTTGCTCTTACTGGAAACACCAAAAAGGTAACAAAAGAAAACTGTATGAGGGTTGGTATGGATGGCCTTATATTGAAACCTGTTTCTGTTGACAAAATGAGGGGTGTTTTATCAGAACTATTGGAGCGCCGAGTTCTGTTCGAAACTGTTTAA 2025 0.4044 MESCNCIDPQVPADDLLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFRIHSRTVAVVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHLPVINQVFSSNRAVKISPNCPVARLRPYAGKYMPGAVVAVRVPLLHLSNFQIYDWPEVSTRSYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQETDLTAEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLEATTFNLHSLFREVLNLIKPVASVKKLSLTSHIASDLPMYAIGDEKRLMQTILNVVGNAVKFSKEGCISISAFVAKPESFRDARIPDFLPVLSDNHFYLRVQVKDSGSGINPQDIPKIFTKFAQNQSLTTRNPAGSGLGLAICRRVSRTVTKGLLMHLGCDVTTASSSEECLRVVSLEHEVVFMDVCAGLDGYELAIRIHEKFTKHQDRPLIVALTGNTKKVTKENCMRVGMDGLILKPVSVDKMRGVLSELLERRVLFETV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00026 674 Pfam His Kinase A (phospho-acceptor) domain 344 408 IPR003661 GO:0000155|GO:0007165
Gma09g00026 674 SUPERFAMILY CheY-like 558 667 IPR011006 -
Gma09g00026 674 SMART gaf_1 158 317 IPR003018 GO:0005515
Gma09g00026 674 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 397 561 IPR036890 -
Gma09g00026 674 PRINTS Bacterial sensor protein C-terminal signature 511 525 IPR004358 GO:0016310|GO:0016772
Gma09g00026 674 PRINTS Bacterial sensor protein C-terminal signature 529 539 IPR004358 GO:0016310|GO:0016772
Gma09g00026 674 PRINTS Bacterial sensor protein C-terminal signature 546 564 IPR004358 GO:0016310|GO:0016772
Gma09g00026 674 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 562 IPR003594 -
Gma09g00026 674 Pfam GAF domain 158 307 IPR003018 GO:0005515
Gma09g00026 674 SUPERFAMILY GAF domain-like 161 310 - -
Gma09g00026 674 SMART HKATPase_4 455 593 IPR003594 -
Gma09g00026 674 Gene3D - 309 407 - -
Gma09g00026 674 Pfam Response regulator receiver domain 559 658 IPR001789 GO:0000160
Gma09g00026 674 Gene3D - 136 308 IPR029016 -
Gma09g00026 674 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 558 671 - -
Gma09g00026 674 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 557 - -
Gma09g00026 674 Gene3D - 412 560 IPR036890 -
Gma09g00026 674 PANTHER ETHYLENE RECEPTOR 1-LIKE 558 671 - -
Gma09g00026 674 PANTHER ETHYLENE RECEPTOR 1-LIKE 2 557 - -
Gma09g00026 674 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 329 409 IPR036097 GO:0000155|GO:0007165
Gma09g00026 674 SMART REC_2 556 661 IPR001789 GO:0000160
Gma09g00026 674 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Gma09g00026 674 ProSiteProfiles Histidine kinase domain profile. 350 567 IPR005467 -
Gma09g00026 674 CDD HisKA 341 404 IPR003661 GO:0000155|GO:0007165
Gma09g00026 674 Gene3D - 561 674 - -
Gma09g00026 674 ProSiteProfiles Response regulatory domain profile. 549 665 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00026 Gma-Chr9 222821 228312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00026 1 672 Miscellaneous Gene Families AT1G66340 73.144 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma09g00026 GAF 2.4e-15 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00026 K14509 - gmx:100795799 1068.53