Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00011 ATGGAGCCCGAGCCCGAACCCAAGCTTGAGCCTGAGCCAGAGCCCGGGCCTGAGTTTAGTTCGAAAGAGGAAGCATTCTCATACTACCAAACCTACGCCAAATCCGTGGGCTTTTCCGCCATAATCAAAGCCAGCCGTCGATCTCGAATCTCCGGCAACTTCATTGACGCCAAATTCGCCTGCACCCGCTACGGCACTCCACCGAACCCTCAAAAACCCAAGCCCAAACGGGCCCGAACAAGCCCCAAAACTGATTGCAAGGCCTCCATGCACGTCAAACGAACACCCCACGGCACATGGATCATCTCTTCCTTCATCAAACACCATAACCACCAAACTAACTCAAATAATAATGCAAGTCCTTCGAGGAAGCCTAAGATTAAGAAAACGCTGCATCATTTGGTTTTCGCCGAAGGAGACCTTCAATTTCTGCTTGATACTTTCATGTCTATGCAAAACGAAAACCCTAATTTCTTTTACGCCGTTGATTTTAATGAGGAGCAGCGTTTGAGAACCGTTTTCTGGGTGGATGCTAAAGCCAGGCTTGATTACAGACACTTTAGTGATGTGGTGCTTTTGGACACCATGCATGTTAAAAATGAGTGCAAATTGCCCTTTGTTCCGTTTGTTGGTGTTAACCACCATTTTCAGGTTTTTTTGCTTGGGTTGGCGTTTGTGTCTGACGAGTCCGAATCGACGTTTTCGTGGCTGATGAGGAGTTGGTTGAGAGCAATGGGAGGATGTGCTCCTAAGGTGATGCTCACTGACTGCGACGAGGCGCTGAAGAAAGCTGTTGCTGAAGTGGCTCCTGAGTCTTGGCATTGTTTTTGTCTGTGGCACGTGTTGAGCAAGGTTCCAGAGAAGCTCGGTCGCGTGATGCAACGGCATGGTGGGGAGTTTTTGACTAGGTTTAACGAGTGTGTTTTGAGGTCTAGGACAAAGGAGCAGTTTGAGAAGAGGTGGGGGAAAATGGTTGGGAAGTTTGAGTTAGGTGATGAGAGTTGGTTGTGGGATATTTATGAGGATCGCGAACGGTGGGTACCGGCCTTTATGAAAGGCAGGGTTTTAGCAGGGTTGTCTACCGTGCAGAGATCAGAGGCTATGAACTGTTTGTTTGACAAATATGTGCAGAGGAAAACTACTTTGAAAGAGTTTGTGGAGCAATACAGAGTGGTATTGCAGGATAAGTGTGAGGAGGAAGCGAAAGCAGATTTTGTAACGTTGCATAGACAGCCAGCGTTGAAGTCCCCGTCGCCGTATGGGAAACAAATGGTGGAGTTATACACGAATGAGGTGTTTAAGAAGTTCCAGAGTGAGGTTTTGGGAGCTGTTGCTTGTCATCCAAGAAAAGAAAGAGAAGATGGACCAACAAAAGTGTTTAGGGTTCAGGATTTTGAAGACAATGAAGATTTTGTTGTCACCTGGAATGAATCGACCTTGGAAGTGTTGTGTGCCTGTTATTTGTTTGAATTCAATGGCTTTCTCTGCAGGCATGTAATGATTGTGCTACAGATTTCTGCTGTACACAGCATCCCACCTCGGTATATATTGAAACGCTGGACGAAAGATGCCAAGAGTAGACAAACAGCAGGAGATTTGTCTATGTCAGATGCAGTTGTCTCTGACTCTAGGGCTAAGCGCTATAATAATTTATGTCAGCAAGCCTTTCAATTGGGTGATGTAGGGTCTTTATCACAAGAGAGTTACATTGCTGCTATAAATGCATTGGAAGCCGCATTGAGAAAGTGTAAGAGCCTGAATGATTCAATTCATAGTGTCAAAGAACCGAACCTGCCATGTTCTGGTTCTCAAGAAGGGATTCTGATCAGTAACAGTGTTGGTCATAGCAACAAAAGGGATAGTACTCTTGGAAAAAGGAAGGTATGCCCAGAACCAGAGACAGTTGCTATTGGAGTAAATTCTAACTGGCAGCAAGTGGAAAACTCCAATACACAAGCAGCTGGTCTTGATTGTTCGTATGAATCACAACAGAGCATTCAAGAGATGAACCCGGATGGTTATTTTTCTTCTGAACAAATTGATTCAGGAATGGTGACTAATCAGAGGTTGTCTGTTGGGATGACACCCAAAACACTTAGGCTGCCCAAACCTGGCGAGATGTCCATGGATCACCTCTGGGTGCTTACAAGGAAGCCATGCATGAATCAGAGGAAGACTTCCAGTGTTGCCTTTGTCTTTGATTTCTGGATTTCACAAAATTTGGAATGGGATGCAGCTGGAAGAGTCCTACAGCCTACAGGGTTGTCTGACTACTGTAGTACATTTGTCTATGTATGGCTGATTTGCATTAGGAGAACGATAAGGTGGCTATTGCCCCGCACACCGTCACAAATGTACCACAACAACCTGAAAGATCCTCAACCGAACTCAAAGACAATCTACACAATTGATGGCGTTCCAAAGCAGAGTTCACTATTACAGTGA 2445 0.4544 MEPEPEPKLEPEPEPGPEFSSKEEAFSYYQTYAKSVGFSAIIKASRRSRISGNFIDAKFACTRYGTPPNPQKPKPKRARTSPKTDCKASMHVKRTPHGTWIISSFIKHHNHQTNSNNNASPSRKPKIKKTLHHLVFAEGDLQFLLDTFMSMQNENPNFFYAVDFNEEQRLRTVFWVDAKARLDYRHFSDVVLLDTMHVKNECKLPFVPFVGVNHHFQVFLLGLAFVSDESESTFSWLMRSWLRAMGGCAPKVMLTDCDEALKKAVAEVAPESWHCFCLWHVLSKVPEKLGRVMQRHGGEFLTRFNECVLRSRTKEQFEKRWGKMVGKFELGDESWLWDIYEDRERWVPAFMKGRVLAGLSTVQRSEAMNCLFDKYVQRKTTLKEFVEQYRVVLQDKCEEEAKADFVTLHRQPALKSPSPYGKQMVELYTNEVFKKFQSEVLGAVACHPRKEREDGPTKVFRVQDFEDNEDFVVTWNESTLEVLCACYLFEFNGFLCRHVMIVLQISAVHSIPPRYILKRWTKDAKSRQTAGDLSMSDAVVSDSRAKRYNNLCQQAFQLGDVGSLSQESYIAAINALEAALRKCKSLNDSIHSVKEPNLPCSGSQEGILISNSVGHSNKRDSTLGKRKVCPEPETVAIGVNSNWQQVENSNTQAAGLDCSYESQQSIQEMNPDGYFSSEQIDSGMVTNQRLSVGMTPKTLRLPKPGEMSMDHLWVLTRKPCMNQRKTSSVAFVFDFWISQNLEWDAAGRVLQPTGLSDYCSTFVYVWLICIRRTIRWLLPRTPSQMYHNNLKDPQPNSKTIYTIDGVPKQSSLLQ 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00011 814 MobiDBLite consensus disorder prediction 1 19 - -
Gma09g00011 814 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 9 115 - -
Gma09g00011 814 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 115 IPR031052 GO:0006355
Gma09g00011 814 MobiDBLite consensus disorder prediction 62 90 - -
Gma09g00011 814 Pfam MULE transposase domain 190 283 IPR018289 -
Gma09g00011 814 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 132 666 - -
Gma09g00011 814 ProSiteProfiles Zinc finger SWIM-type profile. 471 507 IPR007527 GO:0008270
Gma09g00011 814 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 666 IPR031052 GO:0006355
Gma09g00011 814 MobiDBLite consensus disorder prediction 1 23 - -
Gma09g00011 814 Pfam FAR1 DNA-binding domain 27 113 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00011 Gma-Chr9 91589 98108 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma09g00011 MULE 1.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00011 - - gmx:100792626 1350.11