Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03359 ATGGCTGAAATTGAATACCATGCAAAATCCAATACTAACACTCCACCCCTAAAGCTCTTCGGCATCAACATTAACAAGTCCCCAGAAGATCAAACTCACGAATTAGCAAGTTCGAATTCCGAGACTTTCATGAATTCAAGAAAGTACGAGTGCCAGTACTGCTGCAGAGAATTCGCAAACTCACAGGCACTGGGAGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTGAAACGTGCCCAAATGCAAGCTGCTCGTGGTTTTGTCGCTTCACAAATTCATAACACAATCATATCAAGTTTATCTCCACAGTCTCAGCCACCTTTGTCGTGGTTATGCACACCACATGGTGGTGCTGCCTTTGTGGCTCCTGGAAGACTAGTGTATGCTGCAGCTGCTGATGGCCGTGCCCGCCACCACCATCCTCTACCACGGTTCGGTGGCTTCAACGGCGGTGATGGTAGTGGTGGTGGTCGTGAACGAGTCTTCGATTTGGATTTGCATCTTAGCCTATGA 519 0.4836 MAEIEYHAKSNTNTPPLKLFGININKSPEDQTHELASSNSETFMNSRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASQIHNTIISSLSPQSQPPLSWLCTPHGGAAFVAPGRLVYAAAADGRARHHHPLPRFGGFNGGDGSGGGRERVFDLDLHLSL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03359 172 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 108 - -
Gma08g03359 172 PANTHER ZINC FINGER PROTEIN 5 1 108 IPR044299 GO:0010090
Gma08g03359 172 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Gma08g03359 172 SUPERFAMILY beta-beta-alpha zinc fingers 45 76 IPR036236 -
Gma08g03359 172 Gene3D Classic Zinc Finger 26 100 - -
Gma08g03359 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03359 Gma-Chr8 50367335 50368344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03359 12 89 C2H2 Transcription Factor Family AT1G67030 67.500 1.43e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03359 - - gmx:100500337 327.02