Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03341 ATGGGTGCAACTGAGAGAGGCAAAACCAAGTTATCCATTAACTTGGACACTCAATTTCCTTCTGAAATCATTAACTCTGACAAAATTCAAATCTATAAGGGCCTTGACATTATCACCAACAAGGTACCAGAGTCAGAATGTCGTGGTATTTCCCATCATCTGATAGGCATTATTAACGATCCTGACTATGATTTCACTGTTGATGACTTTTGCAAACATGTCCTCAATGCTCTCGATCTCATCTTTGAAAATGGACACCTACCTATTATCGTGGGAGGCTCAAACACTTATCTTGCAACATTGCTTGAGGATCTCAACATGACTTTTCATTCCAAATATGATTGTTGCTTCATTTGGGTTGATGTATCTTTAACTGTGTTGTTTTAG 387 0.3798 MGATERGKTKLSINLDTQFPSEIINSDKIQIYKGLDIITNKVPESECRGISHHLIGIINDPDYDFTVDDFCKHVLNALDLIFENGHLPIIVGGSNTYLATLLEDLNMTFHSKYDCCFIWVDVSLTVLF 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03341 128 Pfam IPP transferase 30 107 - -
Gma08g03341 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 106 IPR027417 -
Gma08g03341 128 Gene3D - 1 128 IPR027417 -
Gma08g03341 128 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 128 IPR039657 -
Gma08g03341 128 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03341 Gma-Chr8 50200329 50200715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03341 1 116 C2H2 Transcription Factor Family AT2G27760 38.983 1.93e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03341 K10760 - gmx:100817288 229.95