Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03340 ATGGTTGATGCGGGAGTTGTGGATGAGATTCAAGAAAACTTTGTGCCTGGAGCAAATTACTCTCGTGGGGTTAGAAGAGCCATCAGGGTTCCTGAGCTAGGAGAGTATTTCCTGGTTGAGAAGGAAATTAGTGATAAGGCTGAAAAAGAGAAGATGCTACAACATGCTATTGCTAGAACCAAAGAGAACACTTGTAAATTGGTTGAGATGCAACTCTTGAAGATCCATAGGATTAACTATGAGCTTGGATGGGGAATGACCAAAATTGATTCCACAGTAGTGTTTGAGGCTATCTTAAAAGGAGTTGACTATAAGAACTTGTATCATGAAATTATATTCAAACCAAGCATGGAGATAGTGAAAAGATTCCTGCAGGAGACAACTCGAATGTGGGGAAAGACACCATGCCAATATGACGAACAAGTGACAATTTATACTTAA 441 0.3968 MVDAGVVDEIQENFVPGANYSRGVRRAIRVPELGEYFLVEKEISDKAEKEKMLQHAIARTKENTCKLVEMQLLKIHRINYELGWGMTKIDSTVVFEAILKGVDYKNLYHEIIFKPSMEIVKRFLQETTRMWGKTPCQYDEQVTIYT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03340 146 Gene3D - 87 124 IPR027417 -
Gma08g03340 146 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 137 - -
Gma08g03340 146 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 1 86 - -
Gma08g03340 146 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 137 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03340 Gma-Chr8 50199864 50200304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03340 1 135 C2H2 Transcription Factor Family AT2G27760 31.677 1.54e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03340 K10760 - gmx:121173984 252.677