Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03317 ATGTCGGAGCTTCGTAGTGGACCGCGACGACGTCGTGCTCCGATTGCTCGTAAAAGCTCTGAACCACCGTCTCCCGCGGGGAGATACGTCAAGACTCGCGCTGCAGTCGCCAGGGAGGCAGCAGCGGCAGCAGAGAGGCCAAGAACTCGTTTGGCGGCCAAAAAAGAGGAGAAGCCCCTTAAAGTAATATCCGATCACACTAAAAAAGACGACGCCGCCATGGCCGACGAGAGCGGTGGCTTGAGTGCAAACAAGGGTGTTGCACAAGAAGATGACACCAACGCAGCTCCTTTTCCGGAGAGAGTTCAAGTAGGAGGCTCACCTGTCTACAAAGTAGAGAGGAAGCTGGGCAAAGGTGGCTTTGGACAGGTTTTTGTTGGCCGACGAGTCACTGGTGGTAACGACCGGAGCACTGGTGCTGGTGCCACTGAGGTGGCTTTGAAATTTGAGCACAGGAACAGCAAAGGCTGTAACTATGGCCCTCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGCAGTCATGGAATACCTAAAGTACACTACAAAGGGAGACAAGGGGAATATTATGTGATGGTGATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATTCCTCAAGTCAGACGATGACTGCGGAAATGGTTGCATGTATTGCAGTCGAGTCCCTGTCGATCCTGGAGAAGATGCATGCAAGAGGCTATGTGCATGGAGATGTAAAACCAGAGAACTTTTTACTTGGTCAACCTTCTACACCACAAGAAAAGAAATTGTTTCTTGTAGACCTTGGATTAGCAACAAAGTGGAGAGACACCTCCAGTGGGCAGCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGGACTGTTCGATATGCCAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATCTTCCTTCATAAAGGCAGGTTACCCTGGCAAGGTTATCAGGGTGATCATAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGTTTTTGCCCTGCTCCTTTTAGGCAGTTCCTTGAGATTGTAGTGAACATGAAGTTTGATGAAGAACCTAACTATTCCAGGCTAATATCTTTGTTTGATGGTATGCTTGGACCGAATCCTGCATTGAGGCCAATTAACACTGAAGGTGCTCAAAAGGTCGGGCAGAAGAGGGGTAGATTGAATATTGAGGAAGAGGATGATTCACAGCCCAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCAAGACTGCCAATGAAGCAAAGGTACCATTACAATGTAGCGGACGCAAGATTAGCACAACATGTGGAGAGAGGGATTGCTGATGGCCTTCTGATTAGTTGTGTGGCTTCTTGTTCCAATCTCTGGGCCCTTATTATGGATGCAGGAACTGGCTTTTCAAGTCAAGTTTATAAGTTGTCACCATTTTTCTTACACAAGGAATGGATCATGGAACAGTGGGAGAAGAACTATTACATTACTTCTATTGCAGGGGCTAATAATGGGAGCTCTCTCGTGGTGATGTCAAAAGGCACACAGTATACACAACAATCATACAAAGTAAGTGACTCATTCCCATTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTGACTTCAATGGCTACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCACGAAATGCTGGATTCAGTGATCAGGTTGTTGAACTTGATTTTCTCTATCCTAGTGAGGGAATCCACAGACGATGGGATAATGGTTATAGGATTACAGCAACGGCTGCTACATGGGATCAATCTGCTCTTATACTTAGCATTCCTAGGCGCAGGCCAGGAGATGAAACCCAGGAAACTCTGCGTACATCTCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGTTTGTGCTATGGGCGCACAGTATGCTAA 2019 0.4611 MSELRSGPRRRRAPIARKSSEPPSPAGRYVKTRAAVAREAAAAAERPRTRLAAKKEEKPLKVISDHTKKDDAAMADESGGLSANKGVAQEDDTNAAPFPERVQVGGSPVYKVERKLGKGGFGQVFVGRRVTGGNDRSTGAGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQTMTAEMVACIAVESLSILEKMHARGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDHKSFLVCKKKMGTSPEMLCCFCPAPFRQFLEIVVNMKFDEEPNYSRLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFSSQVYKLSPFFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03317 672 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 68 643 - -
Gma08g03317 672 Gene3D Transferase(Phosphotransferase) domain 1 81 429 - -
Gma08g03317 672 SUPERFAMILY Protein kinase-like (PK-like) 110 393 IPR011009 -
Gma08g03317 672 SMART serkin_6 110 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03317 672 ProSiteProfiles Protein kinase domain profile. 110 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03317 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Gma08g03317 672 CDD STKc_CK1 110 385 - -
Gma08g03317 672 MobiDBLite consensus disorder prediction 43 75 - -
Gma08g03317 672 MobiDBLite consensus disorder prediction 1 86 - -
Gma08g03317 672 ProSitePatterns Protein kinases ATP-binding region signature. 116 148 IPR017441 GO:0005524
Gma08g03317 672 MobiDBLite consensus disorder prediction 1 17 - -
Gma08g03317 672 PANTHER CASEIN KINASE-RELATED 68 643 - -
Gma08g03317 672 Pfam Protein kinase domain 110 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03317 Gma-Chr8 49947116 49954989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03317 83 267 AGC Kinase Gene Family AT1G03920 24.623 1.14e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gma08g03317 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03317 - - gmx:100803733 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02692 18 61102002 61109217 Gma08g03317 08 49947116 49954989 GST
Gma18g01702 18 47593815 47597354 Gma08g03317 08 49947116 49954989 GST