Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03312 atgagagctataagTCACCACCTTTCACTGCTCAATTGGAGAATCTCTACCTCACGATCTCTTTTTTCTCTGAGAAATACTTGTACCAATACCATGTCTCAATCTGATAATTCCTCTCCTTTTACCACACCCAGATTGGTTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTCAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCCGATCATCCACACCGAGGTTTGTCCATATTATGTATACTTTGCTTTATTTTCGGATTCCAGGGAGGCATCACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAGCTGGTGATGTTCAGTGGATGACCGCAGGAAGGGGAATAATTCACTCTGAAATGCCAGCAGAAGCAAACAACAACAAGGGATTGCAACTGTGGATCAATTTATCATCCAGGGACAAAATGATCGAGCCTAATTACCAAGAACTTCCAAGTGAGAACATAGCAACAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGGGAAGCAATGGGAGTGCATTCGCCTGTGTACACACGAACACCAACCATGTACCTTGTTTTCTCCATGATGCCCAAAACTCAGTGGAATCAGAGCATTCCAGAGTCGTGGAATGCCTTTGTTTATATAATTGAAGGTGAAGGAGTTTTCGGGTCTCCAACATCATCCCCAACTGTGCCACACCATGTCCTTGTTTTGACTCAAGGTGATGGCCTCAGCGTATGGAATAACTCTTCAAAGCCTTTGAGATTTGTTCTGATTGGAGGCCAACCACTTAATGAGCCAGTTGTTCAGCATGGCCCTTTTGTGATGAACACGCAGTCTGAGATTGAGAACACAATTGAAGACTATCACTATGGCAGGAATGGCTTTGAGATGAGCAAGTATTGGATGTCTCAATAG 993 0.4381 MRAISHHLSLLNWRISTSRSLFSLRNTCTNTMSQSDNSSPFTTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGLSILCILCFIFGFQGGITHQDFAGHKGTIRAGDVQWMTAGRGIIHSEMPAEANNNKGLQLWINLSSRDKMIEPNYQELPSENIATAEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPKTQWNQSIPESWNAFVYIIEGEGVFGSPTSSPTVPHHVLVLTQGDGLSVWNNSSKPLRFVLIGGQPLNEPVVQHGPFVMNTQSEIENTIEDYHYGRNGFEMSKYWMSQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03312 330 PANTHER PIRIN-LIKE PROTEIN 37 330 - -
Gma08g03312 330 PANTHER PIRIN-RELATED 37 330 IPR012093 -
Gma08g03312 330 Gene3D Jelly Rolls 184 289 IPR014710 -
Gma08g03312 330 SUPERFAMILY RmlC-like cupins 45 327 IPR011051 -
Gma08g03312 330 Pfam Pirin 65 162 IPR003829 -
Gma08g03312 330 PIRSF Pirin 43 328 IPR012093 -
Gma08g03312 330 CDD cupin_pirin_C 212 288 - -
Gma08g03312 330 CDD cupin_pirin_N 62 164 - -
Gma08g03312 330 Pfam Pirin C-terminal cupin domain 215 320 IPR008778 -
Gma08g03312 330 Gene3D Jelly Rolls 58 315 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03312 Gma-Chr8 49884573 49886086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03312 42 325 Calmodulin-binding Proteins AT3G59220 61.189 7.30e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03312 K06911 - gmx:100802145 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02697 18 61171940 61173868 Gma08g03312 08 49884573 49886086 GST