Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03307 ATGGGTTGCTTTTCATGTTTCGATTCGAGTTCCAAGGAGGATCACAATCTCCGTCCTCAGCACCAACCCAATCAACCTCTCCCTTCTCAGATTTCCAGATTGCCCTCTGGAGCAGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGAGAACTGCAACAGCCTCCTCCCACCGTCCAAATTGCTGCTCAAACATTTACTTTCCGTGAACTTGCCGCTGCAACTAAAAACTTTAGACCAGAGTCCTTTGTTGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGCTCAGATTGTTGCTGTCAAACAGTTAGACAAAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTACATCACCCTAACCTTGTCAATCTCATTGGATACTGTGCGGATGGGGATCAACGCCTCCTCGTTTATGAATTTATGCCTTTGGGATCATTGGAAGATCACCTTCATGatcttccccctgataaggaaccactagattggaacactagaatgaaaattgctgttggtgctgcaaaaggattagaataccttcacgataaggcaaatcctcctgtcatctacagagacttcaagtcatctaacatattacttgatgaaggataccacccaaaactttctgactttggtcttgcgaagcttggtcctgttggtgacaaatcacatgtttctacccgtgtcatgggaacttatggttactgtgctcctgagtatgctatgactggacagctgactgtgaagtctgatgtatatagttttggggtggtcttcttagagctgattactggccgtaaagcaattgacagcacccagccgcagggagaacagaaccttgtcacatggGCACGTCCACTTTTTAATGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCCAGGCTGCAGGGGCGATTTCCCATGCGGGGTCTTTACCAGGCTCTTGCTGTGGCATCAATGTGCATTCAAGAATCAGCTGCAACGCGTCCTCTAATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCCAATGGTTATAGGGGGTCTAGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATCCAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGGATTTTAAACAGAGATCTAGATAGAGAACGAGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAAAAAAGAAAACAAAGTTTGCAGCAGGGCAGTCTTGATGCTTAA 1350 0.3326 MGCFSCFDSSSKEDHNLRPQHQPNQPLPSQISRLPSGADKLRSRSNGGSKRELQQPPPTVQIAAQTFTFRELAAATKNFRPESFVGEGGFGRVYKGRLETTAQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPQGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNGYRGSSDDKRNRDDKGGRISKNDEAGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENLRQKRKQSLQQGSLDA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03307 449 MobiDBLite consensus disorder prediction 1 57 - -
Gma08g03307 449 MobiDBLite consensus disorder prediction 367 435 - -
Gma08g03307 449 PANTHER OS07G0668900 PROTEIN 1 443 - -
Gma08g03307 449 MobiDBLite consensus disorder prediction 364 449 - -
Gma08g03307 449 Gene3D Transferase(Phosphotransferase) domain 1 156 374 - -
Gma08g03307 449 Pfam Protein kinase domain 82 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03307 449 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Gma08g03307 449 Gene3D Phosphorylase Kinase; domain 1 63 155 - -
Gma08g03307 449 CDD STKc_IRAK 85 353 - -
Gma08g03307 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Gma08g03307 449 SUPERFAMILY Protein kinase-like (PK-like) 64 351 IPR011009 -
Gma08g03307 449 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 443 - -
Gma08g03307 449 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03307 Gma-Chr8 49852970 49857906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03307 1 431 Glycoside Hydrolase AT3G07070 56.347 2.61e-168 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma08g03307 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03307 K13430 - gmx:100305422 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03307 08 49852970 49857906 Gma08g03307 08 49852970 49857906 ECH