Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03304 ATGCCCCCATTTTTAGGTGATTTGGAGCAAGAGAGATACTTCTTTAGCACCAAAGTGGCCAAATATCCCAACGGAAATCGCTCCAACAGAGCCACAAATTCGGGTTATTGGAAGGCAACTGGCTTGGACAAACAAATTGTTACTTCAAAAGGCAACAACCAAGTTGTCGGAATGAAGAAGACACTTGTTTTCTACAGAGGCAAGCCTCCTAATGGATCCAGAACTGATTGGATCATGCACGAGTATCGCCTCATCCTTAACGCCTCTCAGTCTCAGAGCCATGTTGTTCCCATGGAAAATTGGGTTCTGTGTCGCATATTTTTGAAGAGGAGAATTGGTGCTAAAAATGGGGAGGAGAGCAACTCTAAGGTGGTTTTCTATGACTTCCTAGCGCAGAACAAGACCGATTCCTCCTCATCGGTCGCCAGTGGAATTACACATGAATCAGATGAACATGAAGAGAGCAGTAGCTCCAACACCTTCCCTTATACTATTAGAAGAAAACCTTAA 510 0.4412 MPPFLGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVVGMKKTLVFYRGKPPNGSRTDWIMHEYRLILNASQSQSHVVPMENWVLCRIFLKRRIGAKNGEESNSKVVFYDFLAQNKTDSSSSVASGITHESDEHEESSSSNTFPYTIRRKP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03304 169 SUPERFAMILY NAC domain 9 109 IPR036093 GO:0003677|GO:0006355
Gma08g03304 169 Pfam No apical meristem (NAM) protein 9 84 IPR003441 GO:0003677|GO:0006355
Gma08g03304 169 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 168 - -
Gma08g03304 169 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 6 168 - -
Gma08g03304 169 MobiDBLite consensus disorder prediction 135 169 - -
Gma08g03304 169 Gene3D NAC domain 3 113 IPR036093 GO:0003677|GO:0006355
Gma08g03304 169 ProSiteProfiles NAC domain profile. 1 109 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03304 Gma-Chr8 49821564 49823033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03304 6 161 NAC Transcription Factor Family AT5G13180 50.256 5.65e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma08g03304 NAM 1.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03304 - - gmx:100170744 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02704 18 61259170 61260038 Gma08g03304 08 49821564 49823033 GST