Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03288 ATGGCTAGAAGGATATTGTACCAAATCAGTGTTTATCCAGAAGCAAAGGTGTCTGAAGAAGAGTTTGGTGGAATTGGGAAGTTGGAAGGAAAGAATAGATGGGATGCCAGGCTGGAAGATGAAATGAAAAAGATTGTGATGGTTTTGAGAAAGAAGGACATGGCAGACTACTTGAAGTTGAGTAAAGAAGTCTTAAACTTCAACAAGGTAGGAGTCTCTCAGAACTCAGGCAATGTACTGCTTCAATTTCATCCTCACATGAAGGGAATCATTGTGAAGAGTTTGCTAGCAAACTTTTCTAGATATGATAATGAAAGATCCTGTTATCATTTGCACAGGGCAGGGGAGCTCCGACTTCTCACCAAGAAAAATGGTCAAAATCGAATGCTGATTGCTGAAGCGGGTGCTATCCCCTGCCTTGTTGATCTCCTCTATGCACTTGACACCCAAacaagtgtgagCAGCCACCTTTTTCAGCCTCTCTGGGGTGGATGGGAACAGAATTGCAATTGGTGCATCTGGAGCAATCCCAGTATTAGTTGCTCTATTTTGGGAGGGAAGGTGGATGCGGCAAAAGCACTATTGAATCTGTGTTTATCTCAAGGGAACAAAGGACAGGCAATTACAGCCAGTATTGTGCCTAAGTTGATAGAAATGCTAACAGAACCTGATGGGGATATGAGGGATGAGGCATTCGCAGTAATGGCTGTAGTAGCTGCTGGCCATTCCGATGGACAAGCAACAATTGGATCTATGAATGTTGTATCCACTTTGGTGGAATTAGTCAGTAATGGACCTCCTAGGAACAAAGAGAATGCAACTTCAGTGTTGGTTATCCTATGA 843 0.4259 MARRILYQISVYPEAKVSEEEFGGIGKLEGKNRWDARLEDEMKKIVMVLRKKDMADYLKLSKEVLNFNKVGVSQNSGNVLLQFHPHMKGIIVKSLLANFSRYDNERSCYHLHRAGELRLLTKKNGQNRMLIAEAGAIPCLVDLLYALDTQTSVSSHLFQPLWGGWEQNCNWCIWSNPSISCSILGGKVDAAKALLNLCLSQGNKGQAITASIVPKLIEMLTEPDGDMRDEAFAVMAVVAAGHSDGQATIGSMNVVSTLVELVSNGPPRNKENATSVLVIL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03288 280 Pfam Petal formation-expressed 28 70 IPR027949 -
Gma08g03288 280 PANTHER U BOX DOMAIN-CONTAINING 186 280 - -
Gma08g03288 280 SUPERFAMILY ARM repeat 115 278 IPR016024 -
Gma08g03288 280 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 112 152 - -
Gma08g03288 280 PANTHER U BOX DOMAIN-CONTAINING 112 152 - -
Gma08g03288 280 Gene3D - 88 280 IPR011989 -
Gma08g03288 280 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 186 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03288 Gma-Chr8 49646472 49652337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03288 114 280 U-box Gene Family AT3G46510 39.252 4.15e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03288 - - var:108326899 155.992