Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03284 ATGGAGTGTGAAGTTGAATTACAAGGGGGAGATCTGCATGCAGGGGAGGTAACTGACCCAAACCCTATTGGTTTTGGCAACATGGAAGATGAACACACTTTGGCGGTTGCTGAGAGAGAGATGTGGCTGAACAGTGACCAAGACGAGTTCCTAGGTGTCAATGATGCTTCCATGTTCTACGCTGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCATCATCATCATCTTCATCTTCAGCAACACCACTTCCCGTGAAGACCATGACATGTTCCACCACCACCACCACTTCCTCTTCTTCCTCTTCCTCTTCTTGGGCCATGTTGAAGTCAGATGCTGAGGAAGATGCAGAGAAAAACCATTGCAACCGATACATGCATGACCAACTTGATGCAACTTTGTCTTCCACCGCTTCCATGGAGATTTCTCAACAGCAAAACCCTGATCCTGGCCTTGGTGGCACTGTTGGAGAGTGCATGGATGATGTTATGGACACTTTTGGTTACATGGAGCTTTTGGAGGCCAATGATTTCTTTGACCCTGCCTCTATCTTTCAGAACGAGGGTAACGAAAACCCTTTAGAGGAGTTTGGCACACTGGAGGAGCATGTGCCGTTTCATGAAGAGCAACATGCAATGGTGCATCATCAGCAAGGGCAAGCAGAAGAGGAAGATCATCAGGTTCCTTTTTGTGAAGAGATCCAAGGAGATGAAGAAGGTGGTGATGGTGTTGGAGTAGATGATGAGATGAGTAATGTGTTCTTGGAGTGGCTTAAGTCTAACAAGGATAGTGTCTCAGCTAATGACTTGAGGAATGTGAAGCTCAAGAAGGCGACACTCGAAAGCGCGGCGAGGCGGCTAGGGGGAGGAAAAGAAGCCATGAAGCAGTTGCTGAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAGCGCCGAAAGGAGAATAATGGTAGTAGTATTAGCAGTGTACTTCAGGCACAGTTTCAGGATCCTAGTGGCCAGAACAACAACCAGAATACACAAAGTGGTTCATTTGCACCTGAATCAAACACTTGTTTCAACAACCAAACACCATGGTTGAGTTCTCAAACTTTTGCAACAGATCAGGCTCCTCTCATGGTGCCTCCACAGCAATTTCCACAACCCATGGTTGGGTATGTGGGTGACCCTTACACTAGTGGTGCTGCTTCAAATAACATATCAGCCACTCATAACCATAACAACAGCAACCCTTATCAACCTGGTGCAGAACAATACCACATGTTGGAGTCAGCACATTCATGGCCACATTCTCTGTTCAATGTTGCTTCTAACTATAGTCAGTCTTTTGGGGACAATAATGGTCTTAACCCACATGGGGGTTTCGGTGGTGGAGGCTATGGCAATAACCAGTACCCTTATCAGTTTTTTCATGGCCCTGGTGATAGGTTGATGAGGTTGGGGCCCTCCGCGACGAAGGAAGCGAGGAAGAAGAGAATGGCAAGGCAAAGAAGGTTTCTGTCTCATCACAGGCATCATAGTGGTAATCACCAGAATCAAGGGTCTGACCCTCATGCAAGAATGGGGGGTGATAATTGCAACACTGCTTTGGCTGCACCTCATCACGCAAATCCTTCAGCCAATTGGATGTACTGGCAGGCTATGATTGGCGGCGCGGCAGGTCCTTTGGCTCCGGTGATTCCGGCCGAGCCGCCGGTGGTACAACCGGTCGTGGACCGGTCGGCCATGCAGACACAGAATTGTCATCAGAATCGAGTTGCATCAGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAACAAAGCGATGTTGGAAGTTTGGGGAGAATAGTTTTGCCAAAAAAAGAGGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGATACTGGCCGAACAACAAAAGCAGAATGTATTTGCTCGAGAACACTGGTGACTTTGTGAGAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTGTGAAACCAGAGACCAAGAAAGCAGGAAAATCGCAGAAAAACCAGCATGGGACAGGGACTAATGCATCAAGTACAGCTGGTACTGCTGCTAATAATGGCACGTCATCGTCACCGAAAACCAAATCTGAAAAAAGTAGTAAATTAATATAA 2286 0.4685 MECEVELQGGDLHAGEVTDPNPIGFGNMEDEHTLAVAEREMWLNSDQDEFLGVNDASMFYADFPPLPDFPCMSSSSSSSSATPLPVKTMTCSTTTTTSSSSSSSSWAMLKSDAEEDAEKNHCNRYMHDQLDATLSSTASMEISQQQNPDPGLGGTVGECMDDVMDTFGYMELLEANDFFDPASIFQNEGNENPLEEFGTLEEHVPFHEEQHAMVHHQQGQAEEEDHQVPFCEEIQGDEEGGDGVGVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATLESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENNGSSISSVLQAQFQDPSGQNNNQNTQSGSFAPESNTCFNNQTPWLSSQTFATDQAPLMVPPQQFPQPMVGYVGDPYTSGAASNNISATHNHNNSNPYQPGAEQYHMLESAHSWPHSLFNVASNYSQSFGDNNGLNPHGGFGGGGYGNNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFLSHHRHHSGNHQNQGSDPHARMGGDNCNTALAAPHHANPSANWMYWQAMIGGAAGPLAPVIPAEPPVVQPVVDRSAMQTQNCHQNRVASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKAGKSQKNQHGTGTNASSTAGTAANNGTSSSPKTKSEKSSKLI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03284 761 MobiDBLite consensus disorder prediction 493 511 - -
Gma08g03284 761 SMART B3_2 607 709 IPR003340 GO:0003677
Gma08g03284 761 Pfam B3 DNA binding domain 608 704 IPR003340 GO:0003677
Gma08g03284 761 MobiDBLite consensus disorder prediction 711 761 - -
Gma08g03284 761 MobiDBLite consensus disorder prediction 724 755 - -
Gma08g03284 761 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 754 IPR044800 GO:0003700
Gma08g03284 761 CDD BfiI_C_EcoRII_N_B3 605 706 - -
Gma08g03284 761 SUPERFAMILY DNA-binding pseudobarrel domain 606 702 IPR015300 -
Gma08g03284 761 Gene3D - 603 722 IPR015300 -
Gma08g03284 761 MobiDBLite consensus disorder prediction 332 360 - -
Gma08g03284 761 MobiDBLite consensus disorder prediction 487 530 - -
Gma08g03284 761 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 754 - -
Gma08g03284 761 Coils Coil 761 761 - -
Gma08g03284 761 ProSiteProfiles B3 DNA-binding domain profile. 607 709 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03284 Gma-Chr8 49607369 49610655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03284 39 756 B3 DNA Binding Superfamily AT3G24650 47.150 8.13e-167 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma08g03284 B3 3.9e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03284 - - gmx:100795226 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01601 18 44626603 44637988 Gma08g03284 08 49607369 49610655 GST