Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g03277 | ATGGTGGTGATAGAGCAGGAAGAGAGCGAGCATCGAAACGCGAACCCCTCCAACGACGCTTCCGACGGCTTCGAAACCGCCAGCGACACCGATCTCGCCAGTGACGGCGACGACGGTGGAGCCGGCAGCCCGGAAgaacagaatcacatcgaacagagtcataccgaacagaatcacaccgaacagagtcacaccgaGAAACACCAGCAGCAGCAGCAGACGGAGCAAGAGCCGGAACACGATGATCCTCAGAGCACCGAATCATCTGAGAATAATGCGTTGATCAATGAAGAAGAGTCGAGACAGAAAGCATTGGATCAAGCAAATGAAGCAAAGGTAGAAGGGAATAAGCTTTTTGTAGAAGGGAAGTATGAAGAGGCATTATTACAGTATGAACTTGCTTTACAAGTAGCATCTGACATGCCTTCATCTGTGGAAATACGGTCAATATGCCATTCAAACCGTGGTGTGTGCTTTCTGAAACTGGAAAAATATGACAACACAATTAAAGAATGCACAAAAGCATTAGAACTGAATCCTGTGTACGTTAAAGCTTTGGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAGCATTTTGACAAGGCTATTGATGatatgaaaaagatcttagaaattgatccctcaaatgatcaagctaggaaaaccattcggcggctagagacccttgctgcagaaaaaagggaaaagatgattgCACAAGTGAAAGACATGGGCAATTCTTTCCTGCGCTACCTTGGGCTGAAGGAAAACAACTTTAAAGCAGTCAAAGATCCAAACACTGCAAGAAAGAGGCAGTCTAAAGTGATACAGGTAATGTTGGAACTCTGA | 849 | 0.3698 | MVVIEQEESEHRNANPSNDASDGFETASDTDLASDGDDGGAGSPEEQNHIEQSHTEQNHTEQSHTEKHQQQQQTEQEPEHDDPQSTESSENNALINEEESRQKALDQANEAKVEGNKLFVEGKYEEALLQYELALQVASDMPSSVEIRSICHSNRGVCFLKLEKYDNTIKECTKALELNPVYVKALVRRGEAHEKLEHFDKAIDDMKKILEIDPSNDQARKTIRRLETLAAEKREKMIAQVKDMGNSFLRYLGLKENNFKAVKDPNTARKRQSKVIQVMLEL | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g03277 | 282 | ProSiteProfiles | TPR repeat profile. | 183 | 216 | IPR019734 | GO:0005515 | |
Gma08g03277 | 282 | SMART | tpr_5 | 183 | 216 | IPR019734 | GO:0005515 | |
Gma08g03277 | 282 | SMART | tpr_5 | 149 | 182 | IPR019734 | GO:0005515 | |
Gma08g03277 | 282 | SMART | tpr_5 | 108 | 141 | IPR019734 | GO:0005515 | |
Gma08g03277 | 282 | Pfam | Tetratricopeptide repeat | 184 | 216 | IPR013105 | - | |
Gma08g03277 | 282 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Gma08g03277 | 282 | Pfam | Tetratricopeptide repeat | 151 | 180 | IPR001440 | GO:0005515 | |
Gma08g03277 | 282 | MobiDBLite | consensus disorder prediction | 49 | 86 | - | - | |
Gma08g03277 | 282 | ProSiteProfiles | TPR repeat profile. | 149 | 182 | IPR019734 | GO:0005515 | |
Gma08g03277 | 282 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 51 | 273 | - | - | |
Gma08g03277 | 282 | Coils | Coil | 216 | 236 | - | - | |
Gma08g03277 | 282 | SUPERFAMILY | TPR-like | 104 | 228 | IPR011990 | GO:0005515 | |
Gma08g03277 | 282 | Coils | Coil | 94 | 114 | - | - | |
Gma08g03277 | 282 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 51 | 273 | - | - | |
Gma08g03277 | 282 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Gma08g03277 | 282 | Gene3D | Tetratricopeptide repeat domain | 96 | 243 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g03277 | Gma-Chr8 | 49513543 | 49518449 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g03277 | 73 | 250 | Calmodulin-binding Proteins | AT3G25230 | 33.854 | 2.03e-16 | 77.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g03277 | K24926 | - | gmx:100792585 | 497.664 |