Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03262 ATGTTCTGTGCTGGCTTCTTTCAAGTTGGTGAAAACGCCTTCTCCTTTGCCATATGGTTCAACGACCCTCACACTCACAACAACAACCACAACAACAGAAACGTTGTTTGGATTGCAAACCGCGAACAACCCGTTAATGGAAAGCTCTCAAAGCTTTCTCTCTTAAACAGTGGTAGCATCGTCTTGCTTGACGCAGATCAAATCACCACTTGGTCATCAAACACAGCATCGAATGCCCCACTAGAGTTGAATCTCCAAGATGATGGTAATCTTGTGTTACGTGAGCTCCAAGGAACCATTTTGTGGCAAAGTTTTGATTCCCCAACCGATACTCTCCTTCCGGGTCAACCTCTTACTAGATACACACAACTTGTGTCTTCAAGAAGCAAGACTAACCATTCCTCTGGTTTCTATAAGCTGCTCTTTGATAATGACAACCTTCTTCGTCTTATTTACGATGGCCCTGATGTTTCGAGCTCGTATTGGCCTCCTCAATGGCTACTCAGTTGGGATGCTGGAAGGTTTAGTTTCAACAGCAGCAGAGTTGCAGTTTTCAATTCTCTTGGAATTTTCAATTCATCGGACAATTATGGTTTTTCCACAAATGATCATGGCAAGGTGATGCCAAGAAGATTAACACTAGATTCTGACGGAAATGTTCGCGTGTACAGCAGAAATGAGGCTTCAAAGAAATGGTACGTTTCATGGCAATTTATATTTGAAACTTGCACCGTTCATGGGGTTTGTGGTGTTAACAGCACTTGCAATTTTGATCCTAAAAGAGGAAGGATATGCTCGTGTCTACCAGGACACACAGTAAAGAACCATAGTGATTGGTCTTATGGGTGTGAACCCATGTTCAATCTTTCTTGCAACGGAAATGATTCTACCTTTTTGGAGTTGCAAGGTTTTGAGTTTTACGGCTATGACAGTAATTATATACCTAACAGTACCTACATGAATTGTGTGAATTTGTGTTTGCAAGATTGTAACTGCAAAGGGTTCCAGTACAGATATGATGGGGAATATTCTACTTGCTTTACAAAGAGACAGTTGCTGAATGGGAGGCGTTCCACCAGATTTGAAGGAACGATTTACTTGAGACTTCCAAAGAACAATAACTTCTCTAAGGAAGAATCTGTGAGTGCATATGGTCATGTTTTTTCTGTGCAGCTTCACAAAGAGTATGTTAGAAAGCCAGAAAATCGTTTTGTGAGATTTTTTCTGTGGCTTGCTACTGCAGTTGGAGCTTTAGAAGTGGTTTGCTTTTTGATAATTTGGGTTTTTTTGATTAAGACGCGCCAAAAGTCTGGTGCAGATCAACAAGGCTACCATCAAGCAGAAATGGGGTTCAGAAAATATAGTTATTCTGAATTGAAGGAGGCGACAAAAGGGTTCAACCAAGAGATTTCAAGGGGTGCAGAAGGGATTGTGTACAAAGGCATTTTATCAGATCAAAGACATGTAGCAATTAAGAGACTCTATGAAGCCAAACAAGGAGAAGAGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAATCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGATTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAGCATTGCTCTTGGAACGGCACGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATACTGCACTGTGATATAAAGCCTCAAAACATACTTCTCGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGGTTGTCCAAGCTACTAAACAGAAATAACCTCAACAACAATTTAAGGTTTTCAGTGATCAGAGGAACTCGAGGATATATGGCACCGGAGTGGGTATACAACTCACCAATCACCTCCAAAGTAGATGTTTACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGGAAAAACCCAACAACTGGTGTCCATAGCAATGCTGGAGAAGAATCATATAATGGAAGGCTGGTAACATGGGTTAGAGAGAAAAGGGGTGATGCATCTTGGCTAGAGCACATCATTGATCCTGCAATTAAAACAAATTTCGATGAATGTAAGATGGACCTTTTGGCTAGAGTGGCTTTGGATTGTGTTGAGGTAAATAAAGATCGGAGACCCACCATGAGCCAAGTAGTAGAAATGCTTCAAAGCCATGATTGTTTAAGGTGTTGA 2241 0.4096 MFCAGFFQVGENAFSFAIWFNDPHTHNNNHNNRNVVWIANREQPVNGKLSKLSLLNSGSIVLLDADQITTWSSNTASNAPLELNLQDDGNLVLRELQGTILWQSFDSPTDTLLPGQPLTRYTQLVSSRSKTNHSSGFYKLLFDNDNLLRLIYDGPDVSSSYWPPQWLLSWDAGRFSFNSSRVAVFNSLGIFNSSDNYGFSTNDHGKVMPRRLTLDSDGNVRVYSRNEASKKWYVSWQFIFETCTVHGVCGVNSTCNFDPKRGRICSCLPGHTVKNHSDWSYGCEPMFNLSCNGNDSTFLELQGFEFYGYDSNYIPNSTYMNCVNLCLQDCNCKGFQYRYDGEYSTCFTKRQLLNGRRSTRFEGTIYLRLPKNNNFSKEESVSAYGHVFSVQLHKEYVRKPENRFVRFFLWLATAVGALEVVCFLIIWVFLIKTRQKSGADQQGYHQAEMGFRKYSYSELKEATKGFNQEISRGAEGIVYKGILSDQRHVAIKRLYEAKQGEEEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYSIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLNNNLRFSVIRGTRGYMAPEWVYNSPITSKVDVYSYGIVLLEMITGKNPTTGVHSNAGEESYNGRLVTWVREKRGDASWLEHIIDPAIKTNFDECKMDLLARVALDCVEVNKDRRPTMSQVVEMLQSHDCLRC 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03262 746 ProSiteProfiles Protein kinase domain profile. 464 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03262 746 CDD B_lectin 2 108 IPR001480 -
Gma08g03262 746 Gene3D - 108 235 IPR036426 -
Gma08g03262 746 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 743 - -
Gma08g03262 746 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 743 - -
Gma08g03262 746 Gene3D Transferase(Phosphotransferase) domain 1 539 743 - -
Gma08g03262 746 SUPERFAMILY alpha-D-mannose-specific plant lectins 32 156 IPR036426 -
Gma08g03262 746 Gene3D Phosphorylase Kinase; domain 1 429 538 - -
Gma08g03262 746 ProSiteProfiles PAN/Apple domain profile. 291 365 IPR003609 -
Gma08g03262 746 Pfam D-mannose binding lectin 35 121 IPR001480 -
Gma08g03262 746 ProSiteProfiles Bulb-type lectin domain profile. 1 106 IPR001480 -
Gma08g03262 746 CDD STKc_IRAK 470 739 - -
Gma08g03262 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Gma08g03262 746 SMART blect_4 1 108 IPR001480 -
Gma08g03262 746 SMART serkin_6 464 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03262 746 Pfam Protein kinase domain 468 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03262 746 Pfam S-locus glycoprotein domain 193 274 IPR000858 GO:0048544
Gma08g03262 746 SUPERFAMILY Protein kinase-like (PK-like) 443 738 IPR011009 -
Gma08g03262 746 PIRSF SRK 1 745 IPR024171 GO:0004674
Gma08g03262 746 CDD PAN_AP_plant 287 370 - -
Gma08g03262 746 Gene3D - 8 107 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03262 Gma-Chr8 49383505 49385768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03262 432 740 Trihelix Transcription Factor Family AT5G38560 41.176 1.43e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma08g03262 Pkinase 9.3e-53 CL0016