Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03261 ATGTTCTGTGCTGGCTTCTTTCAAGTTGGTGAAAATGCCTTCTCCTTTGCCATATGGTTCAACGACCCTCACACTCACAACAACAACCACACCGTGGTTTGGATGGCAAACCGTGAAACACCCGTTAATGGAAGGCTATCAAAGCTTTCCCTCTTAAACAGTGGTAACATGGTCTTGGTTGGTGCAGGTCAAATCACTACATGGTCATCAAACACAGCATCAGATGCTCCAGTAAAGTTGCATCTCCAAGATGATGGCAATCTTGTGTTACTTGATCTCCAAGGAACCATTTTGTGGCAAAGTTTTGATACCCCAACTGATACTCTCCTTCCCGGTCAATTACTTACCAGATACACACAACTAGTGTCTTCAAGAAGCCAGACTAACCATTCTCCTGGTTTCTATAAGATGCTATTTGATGATGACAACGTTCTTCGTCTTATTTATGATGGTCCTGATGTCTCAAGCACATATTGGCCACCACCATGGCTACTCAGTTGGCAAGCTGGAAGGTTTAATTACAACAGCAGCAGAGTTGCAGTGTTAAATTCTATTGGAAATTTCACTTCATCGGATAATTATGATTTTTCCACGGATGATCATGGCACGGTGATGCCAAGAAGATTAAAACTGGATTCAGATGGAAACGCTCGTGTGTACAGTAGAAATGAGGCTTTAAAGAAATGGGGACGGAGATGCTCGTGTTTACCAGGATACAGAGTGAAGAACCATAGTGATTGGTCTTACGGGTGTGAACCCATGTTTGATCTTACTTGCAGCAGAAATGAGTCTATCTTTTTGGAGATACAGGGCGTTGAGTTATATGGTTATGATCACAATTTTGTCCAAAACAGTACATACATAAACTGTGTGAATTTGTGTTTGCAAGATTGTAACTGCAAAGGGTTTCAGTACAGATATGATGGTAACCAAATATTTAGCTGCTTTACAAAGTCACAGTTGTTGAATGGAAGGCGTTCACCAAGTTTTAACGGAGCAATTTACTTGAGGCTGCCAATCACCAATAACTTCTCCAAGGAAGAATCTGTGAGTGCAGATGATCATGTTTGTTCTGTGAAGCTTCACAAAGACTATGTTAGAAAGCCAGAAAATCGTTTGGTGAGATTTTTTCTGTGGCTTGCTACTGCAGTTGGGGCTTTAGAAGTGATTTTCTTTTTCCTGATTTGGGGTTTCTTGATTTGGAACCTCAAAACGTCTAGTGCAGATCAGCAAGGCTACCATCTTGCAGCGGTGGGATTCAGAAAATATAGTTATTTGGAGTTGAAGAAGGCAACAAAGGGGTTCAGCCAAGAGATTGGAAGAGGTGCAGGAGGGATTGTGTACAAAGGCATTTTATCAGATCAAAGACATGTTGCAATTAAGAGACTCTATGATGCTAAGCAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAACCACATGAATTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAGAATGGTTCTTTGGCACAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAGCATTGCTCTTGGAACGGCAAGGGTTCTGGCATATCTTCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGACATAAAGCCCCAGAACATACTTCTTGATGCTAGTTATCAGCCCAAGGTAGCAGATTTTGGCCTGTCCAAGCTACTAAATAGAAACAACCTCAACAATTCAAGTTTTTCAATGATCAGAGGAACCAGAGGGTATATGGCACCTGAGTGGGTTCTGAACTTAGCAATCACCTCAAAGGTTGATGTTTACAGTTATGGAATTGTTCTATTGGAGATGATAACTGGGAAGAGCCCAACAACAACCGGTGTTCAAAACATTGATGGAGAAGAGCCATACAATGGAAGGCTGGTAACATGGGTGAGAGAGAAAAGGAGTGCCACATCTTGGTTAGAGCACATCATTGATCCTGCAATTAAGACAAATTATGATGAATGTAAGATGAACCTTTTGGCTACAGTTGCTTTGGACTGTGTGGAGGAAGACAAAGATGTAAGGCCCACCATGAGCCATGTGGTAGAAATGCTACAAAGCCATGAAAGTGATCCTCGTAATATCATCAATGCTTGA 2163 0.4161 MFCAGFFQVGENAFSFAIWFNDPHTHNNNHTVVWMANRETPVNGRLSKLSLLNSGNMVLVGAGQITTWSSNTASDAPVKLHLQDDGNLVLLDLQGTILWQSFDTPTDTLLPGQLLTRYTQLVSSRSQTNHSPGFYKMLFDDDNVLRLIYDGPDVSSTYWPPPWLLSWQAGRFNYNSSRVAVLNSIGNFTSSDNYDFSTDDHGTVMPRRLKLDSDGNARVYSRNEALKKWGRRCSCLPGYRVKNHSDWSYGCEPMFDLTCSRNESIFLEIQGVELYGYDHNFVQNSTYINCVNLCLQDCNCKGFQYRYDGNQIFSCFTKSQLLNGRRSPSFNGAIYLRLPITNNFSKEESVSADDHVCSVKLHKDYVRKPENRLVRFFLWLATAVGALEVIFFFLIWGFLIWNLKTSSADQQGYHLAAVGFRKYSYLELKKATKGFSQEIGRGAGGIVYKGILSDQRHVAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYSIALGTARVLAYLHEECLEWILHCDIKPQNILLDASYQPKVADFGLSKLLNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTTTGVQNIDGEEPYNGRLVTWVREKRSATSWLEHIIDPAIKTNYDECKMNLLATVALDCVEEDKDVRPTMSHVVEMLQSHESDPRNIINA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03261 720 SUPERFAMILY alpha-D-mannose-specific plant lectins 29 159 IPR036426 -
Gma08g03261 720 SUPERFAMILY Protein kinase-like (PK-like) 411 708 IPR011009 -
Gma08g03261 720 SMART serkin_6 433 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03261 720 PIRSF SRK 1 231 IPR024171 GO:0004674
Gma08g03261 720 PIRSF SRK 226 718 IPR024171 GO:0004674
Gma08g03261 720 Gene3D Phosphorylase Kinase; domain 1 400 507 - -
Gma08g03261 720 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 230 - -
Gma08g03261 720 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 228 712 - -
Gma08g03261 720 CDD PAN_AP_plant 255 339 - -
Gma08g03261 720 Gene3D - 2 104 IPR036426 -
Gma08g03261 720 ProSiteProfiles Bulb-type lectin domain profile. 1 103 IPR001480 -
Gma08g03261 720 Pfam D-mannose binding lectin 31 118 IPR001480 -
Gma08g03261 720 CDD STKc_IRAK 439 708 - -
Gma08g03261 720 ProSiteProfiles PAN/Apple domain profile. 259 339 IPR003609 -
Gma08g03261 720 ProSiteProfiles Protein kinase domain profile. 433 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03261 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Gma08g03261 720 ProSitePatterns Protein kinases ATP-binding region signature. 439 461 IPR017441 GO:0005524
Gma08g03261 720 CDD B_lectin 2 105 IPR001480 -
Gma08g03261 720 Gene3D Transferase(Phosphotransferase) domain 1 508 718 - -
Gma08g03261 720 Pfam PAN-like domain 259 320 IPR003609 -
Gma08g03261 720 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 230 - -
Gma08g03261 720 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 228 712 - -
Gma08g03261 720 SMART blect_4 1 105 IPR001480 -
Gma08g03261 720 Pfam Protein kinase domain 436 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03261 720 Gene3D - 106 231 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03261 Gma-Chr8 49373294 49375543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03261 423 711 Trihelix Transcription Factor Family AT5G38560 41.472 4.48e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma08g03261 Pkinase 2.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03261 - - gmx:100784287 1459.89