Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03240 ATGTGTTTCAGCAGCTGTGCAAACTTGTTCTTTGTTCTGTTCATACTGTTTTGTTATGTGTTGGATGTTGCTATTGCCGTAGACACCATCACATCATCACAACCCGTCAAGGACCCTGAAACACTAAGATCCAAAGATGGTAACTTCACTTTGGGGTTCTTCAGTCCTCAAAACTCCAAAAACCGCTATGTTGGAATTTGGTGGAAATCTCAGTCCACAGTCGTATGGGTTGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAATTATTACAATCTCTGAAGATGGCAATCTTGTGGTGTTGAATGGACAGAAACAAGTGGTTTGGTCATCAAATGTGTCCAACACATCATCCAATACAACTTCCCAGTTTTCAGATTATGGCAAACTTGTACTTACCGAAACCACAACGGGAAACATCTTATGGGATAGTTTTCAGCAACCTTCAGATACATTATTGCCCGGCATGAAACTTTCAAGCAACAGTACAAGTATGAGAGTAAAACTTGCATCATGGAAAAGCCCCTCTAATCCCTCTGTTGGGAGCTTCTCTTCGGGTGTTGTTGAACGCATAAACATACTTGAAGTGTTCGTTTGGAATGAAACTCAACCATATTGGCGCAGTGGTCCATGGAACGGTGGGATATTTACGGGGATACCGAGCATGTCACCATATCGTAATGGTTTCAAAGGTGGGGATGATGGGGAAGCAAATACGGAAATCTATTACACAGTTCCAAGTGCATTAACATTTACAATCTATATGTTGAATTCGCAAGGCCAATATGAAGAAAAGTGGTGGTATGATGAGAAGAAAGAAATGCAACTTGTGTGGACAAGTCAAGAATCAGATTGTGATGTTTATGGCATGTGTGGACCGTTCACCAGCTGTAATGCACAGAGCTCACCCATATGTAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAGACAAAACTGGACTGGTGGATGTGTTCGGAGAACACAATTGCAGTGTGAAAGGGTCAAAGATCACAACACAAGTAGAGATACAAAGGAAGATGGATTTTTGAAACTGCAAATGGTTAAAGTTCCAGATTTTCCAGAAGGGTCCCCTGTTGAGCCAGACATATGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCATATACTCATGATGATGGGATTGGTTGCATGTCTTGGACTGGGAATCTACTTGACATACAACAATTCTCAGAAGGAGGACTTGATCTATATATTCGTGTAGCCCACACCGAACTTGATAAAGGGACAAACACAAAAATCATCATTACGATAACAGTGATAATAGGAACTGTCATGATTGTTACTTGTGCATATGTCATGTGGAGGACTTCCAATCATCCAGGCAGGATATGGAACTTAATTAAATCAGCAAGGAAAGGGAACAACAGGGCTTTTGTACGATTTAACAATGATGAAACACCAAACCATCCAAGCCACAAAGTAATTGAAGAACTGTCACAAGTTACACTACCGGAGCTGTTACTGTTCAACTTTGAAAGGGTTGCAACAgctacaaacagcttcgacttgtccaacaaacttgggcagggtggttttggtccagtgtacaagggaaaactacaagatggacaggaaatagcagttaagagactttctagagcgtctggacaaggtctagaagaattcatgaatgaagttgtggtgatttccaagcttcaacaccgcaatcttgtaagactttttggctgctgtgctgaaggcgatgaaaagatgttgatatatgaatacatgccaaacaaaagtttggatgtgtttatctttgATCaatcaagaagtaaactccttgattggaggaagcgcagtagcataatagaaggaatagctcgagggttgctttatcttcacagagactccagactaagaattatacacagagatttgaaggcaagtaatatcttgctagatgaagagctgaatccaaaaatatcagactttggtatggctagaatctttggagggactgaagatcaggccaacactaataggattgttggaacctatggctatatgtcccctgaatatgcaatgcaaggattattttcagagaaatcagatgtctttagctttggtgttttggtactagagattgttagtggaagaagaaACTCAAGCTTTTACGACAACGTGCATGCTCTTAGCCTTTTGGGATTTGCCTGGATACAATGGAGAGAAGGCAATACGTTATCTTTAATGATGGATCAAGAAATACACGATCCTAGTCATCATGAAGATATTTTAAGGTACATACACATAGGACTTCTTTGTGTACAAGAACATGCTGTAGACAGGCCCACTATGGCTGCGGTAATTTCTATGCTTAGCAGTGAGCTTGCGCTTCCTCCTCCAAGTCAACCTGCATTCATCCTGCAGCAAAATATGTTAAATTTGGCGTCATCTGAAGAAACTCTTAGATGTTGCTCCATCAATATTGTTAGTGTCACAGATATCCAAGGTAGATAG 2523 0.3111 MCFSSCANLFFVLFILFCYVLDVAIAVDTITSSQPVKDPETLRSKDGNFTLGFFSPQNSKNRYVGIWWKSQSTVVWVANRNQPLNDSSGIITISEDGNLVVLNGQKQVVWSSNVSNTSSNTTSQFSDYGKLVLTETTTGNILWDSFQQPSDTLLPGMKLSSNSTSMRVKLASWKSPSNPSVGSFSSGVVERINILEVFVWNETQPYWRSGPWNGGIFTGIPSMSPYRNGFKGGDDGEANTEIYYTVPSALTFTIYMLNSQGQYEEKWWYDEKKEMQLVWTSQESDCDVYGMCGPFTSCNAQSSPICSCLKGFEPRNKEEWNRQNWTGGCVRRTQLQCERVKDHNTSRDTKEDGFLKLQMVKVPDFPEGSPVEPDICRSQCLENCSCVAYTHDDGIGCMSWTGNLLDIQQFSEGGLDLYIRVAHTELDKGTNTKIIITITVIIGTVMIVTCAYVMWRTSNHPGRIWNLIKSARKGNNRAFVRFNNDETPNHPSHKVIEELSQVTLPELLLFNFERVATATNSFDLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGCCAEGDEKMLIYEYMPNKSLDVFIFDQSRSKLLDWRKRSSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYDNVHALSLLGFAWIQWREGNTLSLMMDQEIHDPSHHEDILRYIHIGLLCVQEHAVDRPTMAAVISMLSSELALPPPSQPAFILQQNMLNLASSEETLRCCSINIVSVTDIQGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03240 840 SMART serkin_6 522 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03240 840 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Gma08g03240 840 SUPERFAMILY Protein kinase-like (PK-like) 504 794 IPR011009 -
Gma08g03240 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Gma08g03240 840 CDD PAN_AP_plant 333 422 - -
Gma08g03240 840 Pfam PAN-like domain 349 407 IPR003609 -
Gma08g03240 840 SMART ntp_6 349 421 IPR003609 -
Gma08g03240 840 Gene3D Phosphorylase Kinase; domain 1 497 597 - -
Gma08g03240 840 ProSiteProfiles Protein kinase domain profile. 522 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03240 840 Pfam D-mannose binding lectin 73 174 IPR001480 -
Gma08g03240 840 Gene3D - 22 147 IPR036426 -
Gma08g03240 840 CDD STKc_IRAK 528 794 - -
Gma08g03240 840 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Gma08g03240 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 839 - -
Gma08g03240 840 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Gma08g03240 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 839 - -
Gma08g03240 840 CDD B_lectin 33 149 IPR001480 -
Gma08g03240 840 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Gma08g03240 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Gma08g03240 840 SMART blect_4 33 149 IPR001480 -
Gma08g03240 840 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Gma08g03240 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 179 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03240 Gma-Chr8 49137848 49141447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03240 489 840 Receptor kinase-like Gene Family AT3G45860 54.444 1.99e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g03240 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03240 - - gmx:100779455 1658.27