Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03239 ATGGGTTTCAGCAGCCGTGCAAACTTGTTCTTTGTATTGCTTATGTTATGTTGTTGTGTGTTGGATGTTGGTAttgccatagacaccatcacctcatctcagtccatcaaggaccctgaagttctaacttccaaagatggtaacttcactttggggttcttcacccctcaaaactccacaaaccgctatgttggaatttggtggaaatctcaatccacaatcatatgggttgctaacagaaaccaaccactgaatgattcttctggaattgttacaatccatgaagatggcaatcttgtattgcttaagggacagaaacaagtaatttggacaacaaatctgtccaactcgtcatccaatagaacttcccagttttcagattatggtaagcttgtcctcaccgaagccacaacgggaaacatcttgtgggatagttttcagcaaccttcaaatacattattgcccggcatgaaactTTCAACAAATAATAGTACAGGTAAGAAAGTAGAGCTTACATCGTGGAAAAGCCCTTCTAATCCGTCCGTTGGGAGCTTCTCTTCTGGTGTCGTTCAAGGCATAAACATAGTTGAAGTGTTCATTTGGAATGAAACTCAACCATATTGGCGCAGTGGTCCATGGAATGGCAGGCTCTTTACGGGGATACAGAGCATGGCAACTTTGTATCGTACTGGTTTTCAAGGTGGAAATGATGGGGAAGGATATGCAAATATCTACTATACAATACCAAGTTCATCAGAGTTTTTAATCTATATGTTGAATTTGCAAGGCCAATTATTACTAACAGAGTGGGATGATGAGAGGAAAGAAATGGAAGTTACATGGACTAGTCAAGACTCAGATTGTGATGTTTATGGTATATGTGGATCGTTCGCAATCTGTAATGCACAGAGTTCTCCCATATGTAGTTGCTTGAAAGGGTTTGAGGCTAGGAACAAAGAGGAATGGAATAGACAAAACTGGACTGGTGGATGTGTTAGGAGAACACAATTGCAGTGTGAAAGGGTCAAAGATCACAACACAAGTACAGATACAAAAGAAGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCATATTTTGCAGAAGGGTCACCTGTTGAGCCAGACATATGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGCATGTCTTGGACTGGGAATCTACTTGACATACAACAATTCTCAGATGCAGGACTTGATCTATATGTTCGCATAGCCCACACTGAACTTGATAAAGGGAAAAACACAAAAATCATCATTATAATTACAGTGATAATAGGAGCTGTCGTCATTATTACTTGTTCTTGTGCATATGTCATGCGGAGGACTTCCAATCACCCAGCTAAAATATGGCACTTAATTAAATTAAGGAAAGGGAACAGGAATGGTTTTGTACAATCTAAATTTGATGAAACACCAGAACATCCAAGCCACAGAGTAATTGAAGAACTGACACAAGTTCAACAACAGGAGATGTTCGTATTTGATTTCAAAAGGGTTGCAACAgccacaaacaacttccaccaatccaacaaacttggccagggtggtttcggtccagtgtataagggtaaactgcaagatggacaggaaatagcagttaaaagactttctagggcctctggacaaggtctagaagaattcatgaatgaagttgtggtgatttccaagcttcaacaccgcaatcttgtaagactttttggctcttgtattgaaggcgaagaaaagatgttgttatatgaatacatgccaaataaaagtttggatgtgtttatctttgATCCATCAAaaagtaaactcctagattggaggaaacgcattagcataatagaaggaatagctcgaggattgctttatcttcacagagactccagactaagaatcatacacagagatttgaaggcaagtaatatcttgttagatgaagagctgaatccaaaaatatcagactttggtatggctagaatctttggagggactgaagatcaggccaatactctcagggttgtgggaacctatggctatatgtcccctgaatatgcaatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttggtactagagattgttagtggaagaagaaactcaagcttttatgacaatgagaattttcttagtcttttaggatttgcatggatacaatggagggaaggcaacatattatctTGTCATCTGAAGAAAGACAAAAATTATGCTCCATCAATGttctctctcaatatggtggtcaaaaacataaaccagttggaggaaaacattgattctacttatgacaggaaagctgaagtgaaagcctttaatgatccaaaagctggtgtaaaagataagatgattgatggaattcgtagatttcatgaacaagtcactgagggatattctgattga 2475 0.1911 MGFSSRANLFFVLLMLCCCVLDVGIAIDTITSSQSIKDPEVLTSKDGNFTLGFFTPQNSTNRYVGIWWKSQSTIIWVANRNQPLNDSSGIVTIHEDGNLVLLKGQKQVIWTTNLSNSSSNRTSQFSDYGKLVLTEATTGNILWDSFQQPSNTLLPGMKLSTNNSTGKKVELTSWKSPSNPSVGSFSSGVVQGINIVEVFIWNETQPYWRSGPWNGRLFTGIQSMATLYRTGFQGGNDGEGYANIYYTIPSSSEFLIYMLNLQGQLLLTEWDDERKEMEVTWTSQDSDCDVYGICGSFAICNAQSSPICSCLKGFEARNKEEWNRQNWTGGCVRRTQLQCERVKDHNTSTDTKEDGFLKLQMVKVPYFAEGSPVEPDICRSQCLENCSCVAYSHDDGIGCMSWTGNLLDIQQFSDAGLDLYVRIAHTELDKGKNTKIIIIITVIIGAVVIITCSCAYVMRRTSNHPAKIWHLIKLRKGNRNGFVQSKFDETPEHPSHRVIEELTQVQQQEMFVFDFKRVATATNNFHQSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGSCIEGEEKMLLYEYMPNKSLDVFIFDPSKSKLLDWRKRISIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDQANTLRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYDNENFLSLLGFAWIQWREGNILSCHLKKDKNYAPSMFSLNMVVKNINQLEENIDSTYDRKAEVKAFNDPKAGVKDKMIDGIRRFHEQVTEGYSD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03239 824 Pfam Protein tyrosine and serine/threonine kinase 526 737 IPR001245 GO:0004672|GO:0006468
Gma08g03239 824 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
Gma08g03239 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Gma08g03239 824 Pfam D-mannose binding lectin 73 175 IPR001480 -
Gma08g03239 824 PIRSF SRK 2 774 IPR024171 GO:0004674
Gma08g03239 824 SUPERFAMILY Protein kinase-like (PK-like) 508 751 IPR011009 -
Gma08g03239 824 Gene3D Phosphorylase Kinase; domain 1 488 600 - -
Gma08g03239 824 Gene3D - 23 147 IPR036426 -
Gma08g03239 824 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Gma08g03239 824 PANTHER - 11 752 - -
Gma08g03239 824 Pfam PAN-like domain 351 409 IPR003609 -
Gma08g03239 824 SMART serkin_6 525 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03239 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gma08g03239 824 SMART blect_4 33 149 IPR001480 -
Gma08g03239 824 Coils Coil 769 789 - -
Gma08g03239 824 CDD PAN_AP_plant 335 424 - -
Gma08g03239 824 CDD B_lectin 33 149 IPR001480 -
Gma08g03239 824 Gene3D Transferase(Phosphotransferase) domain 1 601 797 - -
Gma08g03239 824 SMART ntp_6 351 423 IPR003609 -
Gma08g03239 824 ProSiteProfiles Protein kinase domain profile. 525 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03239 824 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 11 752 - -
Gma08g03239 824 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03239 Gma-Chr8 49122393 49135504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03239 426 752 Receptor kinase-like Gene Family AT4G05200 52.294 2.18e-106 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g03239 PK_Tyr_Ser-Thr 9.5e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00866 18 10035764 10044229 Gma08g03239 08 49122393 49135504 GST